HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:19.3 nTPM
HPA Brain:74.8 nTPM
GTEx:19.3 nTPM
FANTOM5:86.6 Scaled Tags Per Million
Pig:58.2 nTPM
Mouse:118.0 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020080Antibody HPA020299
Glial cells Not detectedLow
Neuronal cells LowHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.2
1898 Male, age 80, left hemisphere 57.2
2529 Female, age 94, left hemisphere 54.8
1855 Male, age 76, left hemisphere 45.3
2621 Female, age 67, right hemisphere 44.8
1911 Female, age 85, right hemisphere 44.2
2148 Female, age 91, left hemisphere 42.7
Dentate gyrus
nTPM: 46.9
2010 Male, age 76, both hemispheres 55.6
1927 Female, age 91, both hemispheres 53.2
2246 Female, age 85, both hemispheres 47.4
2528 Male, age 74, both hemispheres 45.5
2530 Female, age 94, left hemisphere 42.1
2531 Female, age 67, both hemispheres 37.8
Entorhinal gyrus
nTPM: 62.0
1938 Female, age 85, left hemisphere 87.1
1787 Male, age 76, left hemisphere 71.6
2764 Male, age 80, right hemisphere 67.3
2686 Male, age 75, right hemisphere 50.6
2117 Female, age 91, right hemisphere 47.6
2613 Female, age 94, left hemisphere 47.5
Hippocampus, CA1
nTPM: 55.3
2749 Male, age 80, left hemisphere 89.0
1873 Female, age 85, both hemispheres 52.2
2527 Male, age 74, both hemispheres 51.9
2045 Male, age 76, both hemispheres 42.0
2082 Female, age 91, right hemisphere 41.5
Hippocampus, CA2
nTPM: 52.9
1892 Male, age 76, both hemispheres 69.3
1963 Male, age 80, left hemisphere 61.6
1940 Female, age 85, left hemisphere 55.5
2249 Male, age 74, both hemispheres 45.6
2113 Female, age 91, right hemisphere 44.0
2437 Female, age 94, left hemisphere 41.7
Hippocampus, CA3
nTPM: 47.3
2137 Male, age 80, left hemisphere 64.9
2436 Male, age 74, both hemispheres 56.1
1867 Male, age 76, both hemispheres 52.7
1891 Female, age 85, both hemispheres 45.4
2861 Female, age 67, both hemispheres 34.1
2620 Female, age 94, left hemisphere 30.7
Parahippocampal cortex
nTPM: 58.3
1850 Male, age 80, both hemispheres 94.5
1990 Female, age 91, right hemisphere 65.9
1933 Female, age 85, both hemispheres 64.1
2532 Female, age 72, left hemisphere 61.4
2018 Male, age 76, both hemispheres 56.9
2245 Female, age 91, both hemispheres 52.8
2692 Male, age 74, both hemispheres 50.9
2693 Female, age 94, both hemispheres 49.9
2250 Female, age 67, right hemisphere 48.3
2622 Female, age 67, right hemisphere 38.6
Perirhinal gyrus
nTPM: 74.8
1794 Male, age 80, right hemisphere 81.8
1847 Female, age 91, left hemisphere 80.4
1841 Female, age 85, right hemisphere 78.1
2848 Male, age 76, right hemisphere 73.9
2521 Female, age 94, right hemisphere 59.8
Subiculum
nTPM: 49.6
1977 Female, age 85, both hemispheres 56.3
1901 Male, age 80, both hemispheres 55.2
2438 Female, age 94, left hemisphere 50.0
2042 Male, age 76, both hemispheres 47.1
2619 Male, age 74, both hemispheres 44.9
2729 Female, age 91, right hemisphere 44.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 35.5
Min nTPM: 9.5
Std nTPM: 4.3
Median nTPM: 18.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 35.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 33.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 32.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 31.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 31.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 30.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 28.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 27.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.6
FF:10169-103B7 60 years, female 95.5
FF:10153-102I9 76 years, female 77.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.2
Pig sample Sample description nTPM
Subiculum
nTPM: 51.5
Samples: 4

Max nTPM: 56.1
Min nTPM: 47.9
Sample A Female 56.1
Sample B Female 51.4
Sample C Male 50.5
Sample D Male 47.9
Dorsal hippocampus
nTPM: 58.3
Samples: 4

Max nTPM: 66.3
Min nTPM: 46.0
Sample A Female 65.7
Sample B Female 66.3
Sample C Male 55.1
Sample D Male 46.0
Entorhinal cortex
nTPM: 51.7
Samples: 4

Max nTPM: 61.8
Min nTPM: 44.1
Sample A Female 47.3
Sample B Female 61.8
Sample C Male 53.5
Sample D Male 44.1
Ventral hippocampus
nTPM: 54.6
Samples: 4

Max nTPM: 63.6
Min nTPM: 44.5
Sample A Female 51.5
Sample B Female 44.5
Sample C Male 63.6
Sample D Male 58.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 118.0
Samples: 4

Max nTPM: 132.3
Min nTPM: 110.5
Sample A Male 110.5
Sample B Male 116.5
Sample C Female 112.7
Sample D Female 132.3
Hippocampal formation
nTPM: 116.6
Samples: 4

Max nTPM: 126.0
Min nTPM: 106.1
Sample A Male 113.9
Sample B Male 120.4
Sample C Female 126.0
Sample D Female 106.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
70194946 Antisense, RP_050517_02_A11, Mouse strain C57BL/6J (56 days, male) 8.7

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