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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:50.4 nTPM
HPA:50.4 nTPM
GTEx:64.1 nTPM
FANTOM5:23.8 Scaled Tags Per Million
Pig:12.9 nTPM
Mouse:22.3 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA046265
Glial cells Low
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 50.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 43.7
2481 Female, age 94, left hemisphere 47.2
2290 Female, age 72, unknown 45.5
1857 Female, age 85, left hemisphere 45.2
2289 Male, age 61, right hemisphere 43.5
1781 Male, age 74, unknown 42.7
1854 Male, age 80, left hemisphere 42.6
2846 Female, age 79, unknown 42.2
2288 Male, age 75, left hemisphere 41.0
Claustrum
nTPM: 45.0
2198 Male, age 80, both hemispheres 49.7
2491 Male, age 75, both hemispheres 47.3
1956 Male, age 74, unknown 47.0
2292 Female, age 85, both hemispheres 46.2
2196 Female, age 79, unknown 45.3
2284 Female, age 91, both hemispheres 44.8
2645 Female, age 72, unknown 43.9
2568 Male, age 61, both hemispheres 42.7
2392 Female, age 94, both hemispheres 38.0
Globus pallidus, externus
nTPM: 50.4
2646 Male, age 61, right hemisphere 52.3
2772 Female, age 79, unknown 51.8
2567 Female, age 72, unknown 51.7
1996 Male, age 80, right hemisphere 51.4
2395 Male, age 75, both hemispheres 44.7
Globus pallidus, internus
nTPM: 47.6
2483 Female, age 94, right hemisphere 54.4
2566 Female, age 72, unknown 49.8
2778 Female, age 91, both hemispheres 47.6
2287 Male, age 75, right hemisphere 46.8
2111 Female, age 85, right hemisphere 45.2
2037 Male, age 80, right hemisphere 44.9
1818 Male, age 74, unknown 44.5
Nucleus accumbens
nTPM: 43.1
1806 Female, age 85, left hemisphere 48.2
1783 Male, age 74, unknown 45.4
2698 Female, age 72, unknown 44.4
2732 Male, age 80, right hemisphere 43.2
1856 Female, age 91, right hemisphere 43.1
2286 Male, age 75, left hemisphere 43.1
2391 Female, age 94, left hemisphere 39.2
2824 Male, age 61, right hemisphere 38.4
Nucleus basalis of Meynert
nTPM: 45.4
2569 Male, age 61, both hemispheres 55.7
2484 Female, age 94, left hemisphere 43.4
2821 Male, age 75, both hemispheres 42.0
2393 Male, age 80, right hemisphere 40.4
Nucleus of the diagonal band
nTPM: 41.0
2775 Male, age 80, right hemisphere 43.9
2195 Female, age 85, both hemispheres 41.5
1979 Male, age 74, unknown 40.4
1812 Female, age 91, both hemispheres 40.1
2029 Male, age 61, right hemisphere 39.1
Olfactory tubercle
nTPM: 40.7
2487 Female, age 94, left hemisphere 41.4
1846 Male, age 80, right hemisphere 41.1
1998 Female, age 91, both hemispheres 40.7
2856 Male, age 75, right hemisphere 39.7
Putamen
nTPM: 43.6
2647 Male, age 75, left hemisphere 48.9
2482 Female, age 94, left hemisphere 45.2
2489 Female, age 72, unknown 45.1
2466 Female, age 79, unknown 42.2
1937 Female, age 91, right hemisphere 41.8
1829 Male, age 74, unknown 41.2
1838 Male, age 80, right hemisphere 40.9
Septal nuclei
nTPM: 41.5
1960 Male, age 74, unknown 46.8
2059 Female, age 85, both hemispheres 43.2
2031 Female, age 72, unknown 42.4
2199 Male, age 80, right hemisphere 40.7
2394 Male, age 61, left hemisphere 39.6
2629 Female, age 94, right hemisphere 38.9
2009 Female, age 91, both hemispheres 38.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 64.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 57.0
Samples: 246

Max nTPM: 107.2
Min nTPM: 23.2
Std nTPM: 13.7
Median nTPM: 55.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 107.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 102.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 101.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 99.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 97.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 94.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 87.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 87.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 86.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 83.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 79.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 79.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 78.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 77.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 77.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 76.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 76.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 76.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 75.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 75.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 75.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 75.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 75.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 75.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 74.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 74.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 73.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 72.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 72.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 70.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 70.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 69.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 69.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 69.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 69.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 68.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 67.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 67.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 67.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 67.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 67.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 66.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 66.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 66.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 66.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 65.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 65.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 65.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 64.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 64.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 64.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 64.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 63.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 63.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 63.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 63.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 63.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 63.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 62.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 62.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 62.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 62.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 62.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 61.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 61.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 61.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 61.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 60.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 60.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 60.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 59.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 59.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 59.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 59.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 59.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 59.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 59.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 59.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 59.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 58.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 58.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 58.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 58.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 58.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 57.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 57.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 57.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 56.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 56.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 56.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 56.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 56.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 56.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 56.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 55.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 55.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 55.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 55.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 55.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 55.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 55.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 55.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 55.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 55.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 54.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 54.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 54.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 54.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 53.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 53.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 53.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 53.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 52.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 52.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 52.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 51.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 51.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 51.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 51.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 51.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 51.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 51.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 51.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 51.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 51.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 50.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 50.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 50.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 50.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 50.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 50.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 50.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 50.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 49.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 49.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 49.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 49.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 49.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 49.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 49.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 48.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 48.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 48.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 47.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 47.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 47.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 47.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 46.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 46.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 46.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 46.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 45.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 45.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 45.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 45.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 45.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 44.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 44.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 44.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 44.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 44.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 43.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 43.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 43.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 42.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 42.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 42.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 42.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 42.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 41.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 40.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 40.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 40.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 39.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 36.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 35.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 34.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 33.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 33.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 33.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 27.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 27.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 23.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 61.6
Samples: 246

Max nTPM: 138.3
Min nTPM: 28.6
Std nTPM: 15.9
Median nTPM: 59.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 138.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 122.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 108.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 107.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 105.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 102.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 101.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 97.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 95.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 94.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 94.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 93.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 88.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 87.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 85.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 85.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 84.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 83.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 83.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 83.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 82.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 82.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 81.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 81.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 81.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 80.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 80.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 80.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 79.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 79.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 79.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 79.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 78.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 78.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 78.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 77.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 77.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 77.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 77.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 76.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 76.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 76.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 75.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 75.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 75.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 74.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 74.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 74.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 73.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 73.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 73.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 72.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 72.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 71.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 71.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 70.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 70.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 70.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 70.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 69.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 69.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 69.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 69.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 69.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 69.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 68.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 68.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 68.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 68.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 68.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 68.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 68.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 67.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 67.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 67.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 66.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 66.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 66.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 66.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 65.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 65.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 65.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 65.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 65.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 65.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 64.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 64.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 64.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 64.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 64.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 63.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 63.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 63.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 63.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 63.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 63.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 63.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 63.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 62.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 62.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 62.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 62.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 61.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 61.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 61.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 61.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 61.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 60.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 60.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 60.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 60.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 60.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 60.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 60.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 60.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 60.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 59.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 59.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 59.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 59.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 59.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 58.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 58.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 58.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 58.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 58.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 58.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 58.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 58.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 57.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 57.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 57.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 57.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 56.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 56.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 56.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 56.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 56.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 56.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 56.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 56.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 56.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 55.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 55.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 55.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 55.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 54.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 54.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 54.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 54.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 54.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 54.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 53.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 53.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 53.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 53.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 53.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 53.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 53.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 53.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 53.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 53.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 52.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 52.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 52.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 52.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 52.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 52.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 52.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 52.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 52.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 52.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 51.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 51.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 51.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 51.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 51.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 51.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 51.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 50.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 50.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 50.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 50.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 50.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 49.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 49.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 49.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 49.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 49.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 49.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 49.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 48.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 48.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 48.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 47.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 47.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 47.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 47.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 46.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 46.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 46.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 45.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 45.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 45.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 44.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 44.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 44.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 44.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 44.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 44.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 44.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 43.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 42.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 42.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 42.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 41.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 41.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 41.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 40.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 40.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 39.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 39.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 39.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 38.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 38.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 38.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 38.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 33.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 31.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 30.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 28.6
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Brain - Putamen (basal ganglia)
Average nTPM: 64.1
Samples: 205

Max nTPM: 117.1
Min nTPM: 29.0
Std nTPM: 13.0
Median nTPM: 62.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 117.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 104.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 102.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 101.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 97.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 91.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 90.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 88.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 88.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 88.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 88.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 87.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 86.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 86.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 85.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 84.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 83.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 82.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 81.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 81.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 81.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 81.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 81.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 80.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 80.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 79.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 79.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 79.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 78.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 77.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 77.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 76.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 75.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 75.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 75.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 75.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 75.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 74.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 74.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 73.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 73.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 73.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 72.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 72.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 71.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 71.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 70.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 70.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 70.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 70.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 70.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 70.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 70.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 70.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 70.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 70.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 69.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 69.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 69.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 68.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 68.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 68.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 68.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 68.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 68.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 68.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 68.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 68.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 67.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 66.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 66.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 66.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 66.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 65.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 65.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 65.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 65.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 65.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 65.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 65.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 64.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 64.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 64.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 64.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 64.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 64.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 63.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 63.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 63.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 63.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 63.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 63.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 63.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 63.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 63.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 63.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 62.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 62.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 62.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 62.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 62.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 62.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 62.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 61.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 61.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 61.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 61.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 61.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 61.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 60.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 60.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 60.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 60.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 60.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 60.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 60.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 60.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 60.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 59.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 59.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 59.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 59.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 59.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 59.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 58.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 58.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 58.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 58.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 57.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 57.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 57.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 57.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 57.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 57.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 57.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 57.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 57.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 57.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 56.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 56.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 56.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 56.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 56.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 56.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 55.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 55.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 55.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 55.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 54.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 54.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 54.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 54.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 54.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 53.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 53.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 53.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 53.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 53.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 53.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 53.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 52.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 52.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 52.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 52.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 52.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 52.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 52.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 51.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 50.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 50.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 50.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 50.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 50.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 49.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 48.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 48.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 48.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 48.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 48.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 47.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 47.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 47.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 46.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 45.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 44.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 43.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 43.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 43.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 41.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 40.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 39.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 29.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 23.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 23.8
FF:10164-103B2 76 years, female 23.8
Globus pallidus
Scaled Tags Per Million: 14.7
FF:10161-103A8 76 years, female 17.7
FF:10175-103C4 60 years, female 11.8
Nucleus accumbens
Scaled Tags Per Million: 16.9
FF:10037-101F1 23-56 years, mixed 16.9
Putamen
Scaled Tags Per Million: 20.2
FF:10176-103C5 60 years, female 20.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 12.9
Pig sample Sample description nTPM
Caudate
nTPM: 10.9
Samples: 4

Max nTPM: 13.1
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 12.1
Sample C Male 13.1
Sample D Male 9.8
Putamen
nTPM: 12.9
Samples: 4

Max nTPM: 14.7
Min nTPM: 12.2
Sample A Female 12.2
Sample B Female 12.4
Sample C Male 14.7
Sample D Male 12.4
Septum
nTPM: 10.8
Samples: 4

Max nTPM: 11.4
Min nTPM: 10.1
Sample A Female 11.2
Sample B Female 11.4
Sample C Male 10.3
Sample D Male 10.1
Ventral pallidum
nTPM: 11.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 8.9
Sample A Female 9.6
Sample B Female 12.7
Sample C Male 12.8
Sample D Male 8.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 22.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 16.7
Samples: 4

Max nTPM: 18.0
Min nTPM: 15.4
Sample A Male 16.8
Sample B Male 18.0
Sample C Female 16.5
Sample D Female 15.4
Septum
nTPM: 19.4
Samples: 4

Max nTPM: 23.0
Min nTPM: 16.6
Sample A Male 19.5
Sample B Male 23.0
Sample C Female 16.6
Sample D Female 18.6
Ventral forebrain
nTPM: 22.3
Samples: 4

Max nTPM: 24.0
Min nTPM: 19.8
Sample A Male 24.0
Sample B Male 19.8
Sample C Female 21.7
Sample D Female 23.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68546094 Antisense, RP_050120_02_A01, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
68546094 Antisense, RP_050120_02_A01, Mouse strain C57BL/6J (56 days, male) 0.0

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