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COLON - Expression summary
RNA expressioni
HPA:38.3TPM
GTEx:10.3RPKM
FANTOM5:83.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 38.3
overview Male, age 54 Sample 1
TPM: 42.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 39.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 32.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 45.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 20.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 34.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 48.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 39.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 30.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 46
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 46.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 40.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 30.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 10.3
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 8.5
Samples: 149

Max RPKM: 11.7
Min RPKM: 3.6
Std RPKM: 1.3
Median RPKM: 8.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 11.7
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 11.6
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 11.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 11.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 11.1
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 11.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 10.9
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 10.7
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 10.6
GTEX-XBED-1726-SM-47JYO 60-69 years, male 10.5
Show all
Colon - Transverse
RPKM: 11.7
Samples: 196

Max RPKM: 23.1
Min RPKM: 4.2
Std RPKM: 3.6
Median RPKM: 11.0
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 23.1
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 22.9
GTEX-R55G-1226-SM-48FDC 40-49 years, female 20.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 20.6
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 19.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 19.0
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 18.9
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 18.7
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 18.6
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 18.5
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 83.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 59.5
FF:10014-101C5 62,83,84 years, mixed 83.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.