CD44

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:65.9 FPKM
GTEx:20.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA005785

 

Antibody CAB000112

 

Antibody CAB000316

 

Endothelial cells

Low   Not detected   Medium  

Glandular cells

Medium   Not detected   High  

Peripheral nerve/ganglion

Medium   Not detected   High  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

65.9

overview Male, age 54
Sample 1
FPKM: 44.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 46.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 45.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 24.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 166.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 69.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 65.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 23.0
Samples: 149

Max RPKM: 95
Min RPKM: 5.5
Std RPKM: 13.9
Median RPKM: 20.1
GTEX-ZDTS-2726-SM-5L3E2 95.0
GTEX-11ZU8-1126-SM-5EQ5K 82.4
GTEX-ZYT6-2826-SM-5GICX 70.9
GTEX-14C5O-2626-SM-5RQI5 63.3
GTEX-132AR-2826-SM-5IJFV 54.9
GTEX-13O1R-2426-SM-5KLZZ 53.7
GTEX-WI4N-2226-SM-4OOS9 51.5
GTEX-11TT1-0926-SM-5GU5M 51.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.7
Samples: 196

Max RPKM: 251.3
Min RPKM: 4.3
Std RPKM: 20
Median RPKM: 13.5
GTEX-14C38-2626-SM-5RQI4 251.3
GTEX-ZYVF-2826-SM-5GIDK 86.7
GTEX-14AS3-1126-SM-5Q5CR 64.0
GTEX-Y3I4-1426-SM-4TT9C 59.8
GTEX-ZY6K-1226-SM-5GZYL 50.9
GTEX-11O72-2226-SM-5PNW2 46.5
GTEX-111VG-2226-SM-5N9DU 44.6
GTEX-145LS-2726-SM-5Q5D8 42.7
Show all