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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:72.6 nTPM
GTEx:72.6 nTPM
FANTOM5:143.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001672Antibody HPA066520
Squamous epithelial cells Not detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 72.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 72.6
Samples: 156

Max nTPM: 277.2
Min nTPM: 19.8
Std nTPM: 35.6
Median nTPM: 65.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 277.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 174.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 173.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 161.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 158.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 155.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 140.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 139.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 137.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 134.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 133.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 128.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 124.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 122.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 119.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 116.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 115.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 114.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 111.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 110.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 110.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 110.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 108.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 106.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 105.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 105.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 104.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 95.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 94.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 94.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 93.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 93.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 93.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 92.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 92.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 91.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 90.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 88.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 87.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 87.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 84.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 83.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 82.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 81.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 81.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 80.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 80.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 80.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 79.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 78.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 78.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 76.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 76.8
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 75.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 75.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 74.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 74.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 73.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 73.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 73.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 73.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 73.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 72.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 72.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 72.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 72.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 72.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 71.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 71.2
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 70.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 68.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 67.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 67.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 67.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 66.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 66.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 66.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 65.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 65.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 64.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 63.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 62.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 62.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 62.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 61.7
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 61.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 61.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 59.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 59.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 59.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 58.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 58.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 58.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 58.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 58.3
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 58.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 57.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 57.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 57.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 56.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 56.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 56.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 55.4
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 55.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 55.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 54.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 54.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 52.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 52.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 52.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 52.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 52.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 52.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 51.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 51.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 51.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 50.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 50.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 49.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 48.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 47.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 47.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 47.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 47.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 47.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 47.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 45.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 44.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 43.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 42.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 42.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 41.8
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 41.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 41.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 40.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 40.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 40.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 38.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 37.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 37.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 37.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 37.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 36.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 35.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 34.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 33.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 32.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 31.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 28.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 27.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 26.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 25.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 23.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 22.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 20.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 19.8
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 143.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 143.8
FF:10204-103F6 68 years, female 143.8

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