HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.8 nTPM
HPA:8.8 nTPM
GTEx:8.8 nTPM
FANTOM5:41.0 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:5.6 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031388Antibody HPA031389Antibody HPA031390Antibody CAB025414
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells MediumMediumLowLow









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.8
Sample id Sample description nTPM
Hippocampus
nTPM: 6.0
2621 Female, age 67, right hemisphere 7.2
1898 Male, age 80, left hemisphere 6.6
1911 Female, age 85, right hemisphere 5.9
2529 Female, age 94, left hemisphere 5.7
1855 Male, age 76, left hemisphere 5.3
2148 Female, age 91, left hemisphere 5.1
Dentate gyrus
nTPM: 5.8
2531 Female, age 67, both hemispheres 6.6
2010 Male, age 76, both hemispheres 5.9
1927 Female, age 91, both hemispheres 5.8
2246 Female, age 85, both hemispheres 5.6
2528 Male, age 74, both hemispheres 5.6
2530 Female, age 94, left hemisphere 5.4
Entorhinal gyrus
nTPM: 6.9
1938 Female, age 85, left hemisphere 8.1
1787 Male, age 76, left hemisphere 7.8
2764 Male, age 80, right hemisphere 7.1
2613 Female, age 94, left hemisphere 6.7
2686 Male, age 75, right hemisphere 6.6
2117 Female, age 91, right hemisphere 4.9
Hippocampus, CA1
nTPM: 6.6
2749 Male, age 80, left hemisphere 9.2
2527 Male, age 74, both hemispheres 6.6
1873 Female, age 85, both hemispheres 6.5
2045 Male, age 76, both hemispheres 5.5
2082 Female, age 91, right hemisphere 5.1
Hippocampus, CA2
nTPM: 6.2
1940 Female, age 85, left hemisphere 7.2
2437 Female, age 94, left hemisphere 6.7
1892 Male, age 76, both hemispheres 6.4
2249 Male, age 74, both hemispheres 5.9
2113 Female, age 91, right hemisphere 5.7
1963 Male, age 80, left hemisphere 5.4
Hippocampus, CA3
nTPM: 6.6
2620 Female, age 94, left hemisphere 7.8
2137 Male, age 80, left hemisphere 7.0
1891 Female, age 85, both hemispheres 6.4
1867 Male, age 76, both hemispheres 6.2
2861 Female, age 67, both hemispheres 6.1
2436 Male, age 74, both hemispheres 6.0
Parahippocampal cortex
nTPM: 7.8
2693 Female, age 94, both hemispheres 9.8
2532 Female, age 72, left hemisphere 8.7
1850 Male, age 80, both hemispheres 8.4
2250 Female, age 67, right hemisphere 8.1
2622 Female, age 67, right hemisphere 7.8
1933 Female, age 85, both hemispheres 7.5
2245 Female, age 91, both hemispheres 7.2
2018 Male, age 76, both hemispheres 7.1
1990 Female, age 91, right hemisphere 6.9
2692 Male, age 74, both hemispheres 6.3
Perirhinal gyrus
nTPM: 8.8
1841 Female, age 85, right hemisphere 10.7
1794 Male, age 80, right hemisphere 10.0
2521 Female, age 94, right hemisphere 8.5
2848 Male, age 76, right hemisphere 7.5
1847 Female, age 91, left hemisphere 7.3
Subiculum
nTPM: 6.3
2438 Female, age 94, left hemisphere 7.0
1901 Male, age 80, both hemispheres 6.9
2619 Male, age 74, both hemispheres 6.7
1977 Female, age 85, both hemispheres 6.6
2042 Male, age 76, both hemispheres 5.5
2729 Female, age 91, right hemisphere 5.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 19.5
Min nTPM: 4.7
Std nTPM: 2.4
Median nTPM: 8.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 19.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 18.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 15.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 14.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 14.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 14.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 14.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 13.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 13.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 13.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.0
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 37.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 23.9
Min nTPM: 13.4
Sample A Female 23.9
Sample B Female 19.6
Sample C Male 13.4
Sample D Male 14.7
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 20.6
Min nTPM: 14.3
Sample A Female 18.1
Sample B Female 20.6
Sample C Male 16.3
Sample D Male 14.3
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 11.5
Sample A Female 17.3
Sample B Female 12.7
Sample C Male 11.5
Sample D Male 13.1
Ventral hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 18.5
Min nTPM: 11.7
Sample A Female 18.5
Sample B Female 11.7
Sample C Male 17.1
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.8
Sample A Male 5.1
Sample B Male 4.8
Sample C Female 4.9
Sample D Female 6.1
Hippocampal formation
nTPM: 5.6
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.6
Sample A Male 4.6
Sample B Male 6.4
Sample C Female 6.3
Sample D Female 4.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
69059821 Antisense, RP_050317_04_B05, Mouse strain C57BL/6J (56 days, male) 8.4

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