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TTC39A
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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Follicle cells: Low
Ovarian stroma cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:0.3 nTPM
HPA:0.2 nTPM
GTEx:0.3 nTPM
FANTOM5:1.2 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA028098
Follicle cells Low
Ovarian stroma cells Not detected



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 0.2
overview
Female, age 64
Ovary sample 192
nTPM: 0.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 0.3
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 0.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5


OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.3
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 0.3
Samples: 180

Max nTPM: 4.5
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.2
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 4.5
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 1.6
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 1.3
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 1.0
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 0.9
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 0.9
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 0.8
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 0.8
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 0.8
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 0.7
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 0.6
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 0.6
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 0.6
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 0.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 0.6
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 0.6
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 0.6
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 0.6
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 0.5
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 0.5
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 0.5
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 0.5
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 0.5
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 0.4
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 0.4
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 0.4
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 0.4
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 0.4
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 0.4
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 0.4
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 0.4
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 0.4
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 0.4
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 0.4
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 0.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 0.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 0.4
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 0.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 0.3
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 0.3
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 0.3
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 0.3
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 0.3
GTEX-183WM-1926-SM-72D5F 70-79 years, female 0.3
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 0.3
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 0.3
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 0.3
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 0.3
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 0.3
GTEX-QCQG-1426-SM-48U22 50-59 years, female 0.3
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 0.3
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 0.3
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 0.3
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 0.3
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 0.3
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 0.3
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 0.3
GTEX-11I78-1926-SM-59878 50-59 years, female 0.2
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 0.2
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 0.2
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 0.2
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 0.2
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 0.2
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 0.2
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 0.2
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 0.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 0.2
GTEX-14BIN-1426-SM-664NI 50-59 years, female 0.2
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 0.2
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 0.2
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 0.2
GTEX-15EOM-1526-SM-68723 20-29 years, female 0.2
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 0.2
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 0.2
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 0.2
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 0.2
GTEX-R55G-1526-SM-48FER 40-49 years, female 0.2
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 0.2
GTEX-S341-0726-SM-4AD5R 40-49 years, female 0.2
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 0.2
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 0.2
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 0.2
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 0.2
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 0.2
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 0.2
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 0.2
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 0.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 0.2
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 0.2
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 0.2
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 0.2
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 0.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 0.2
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 0.2
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 0.2
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 0.2
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 0.2
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 0.2
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 0.2
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 0.2
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 0.2
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 0.2
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 0.2
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 0.2
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 0.2
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 0.2
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 0.2
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 0.2
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 0.1
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 0.1
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 0.1
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 0.1
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 0.1
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 0.1
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 0.1
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 0.1
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 0.1
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 0.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 0.1
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 0.1
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 0.1
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 0.1
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 0.1
GTEX-14JG6-0626-SM-68716 30-39 years, female 0.1
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 0.1
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 0.1
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 0.1
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 0.1
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 0.1
GTEX-18D9A-0826-SM-718C1 30-39 years, female 0.1
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 0.1
GTEX-P78B-1926-SM-3P616 40-49 years, female 0.1
GTEX-RU72-2226-SM-46MUE 50-59 years, female 0.1
GTEX-S32W-1226-SM-4AD67 50-59 years, female 0.1
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 0.1
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 0.1
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 0.1
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 0.1
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 0.1
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 0.1
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 0.1
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 0.1
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 0.1
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 0.1
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 0.1
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 0.1
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 0.1
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 0.1
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 0.1
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 0.1
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 0.1
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 0.1
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 0.1
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 0.1
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 0.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 0.1
GTEX-QVJO-3126-SM-COH22 60-69 years, female 0.1
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 0.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 0.0
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 0.0
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 0.0
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 0.0
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 0.0
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 0.0
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 0.0
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 0.0
GTEX-14PKV-1226-SM-6871T 20-29 years, female 0.0
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 0.0
GTEX-Q734-0726-SM-48TZP 40-49 years, female 0.0
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 0.0
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 0.0
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 0.0
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 0.0
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 0.0
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 0.0
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 0.0
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 0.0
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 0.0
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 0.0
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 0.0
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 1.2
FF:10020-101D2 47,75,84 years, female 1.2

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