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ATG16L1
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  • ATG16L1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:7.5 nTPM
HPA:7.5 nTPM
GTEx:11.7 nTPM
FANTOM5:35.4 Scaled Tags Per Million
Pig:15.1 nTPM
Mouse:31.8 nTPM
Allen mouse:1.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA063900
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 7.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 6.8
2846 Female, age 79, unknown 8.1
1781 Male, age 74, unknown 7.0
1857 Female, age 85, left hemisphere 6.8
2290 Female, age 72, unknown 6.8
2481 Female, age 94, left hemisphere 6.6
1854 Male, age 80, left hemisphere 6.5
2288 Male, age 75, left hemisphere 6.4
2289 Male, age 61, right hemisphere 6.1
Claustrum
nTPM: 7.2
2198 Male, age 80, both hemispheres 7.9
2392 Female, age 94, both hemispheres 7.5
2491 Male, age 75, both hemispheres 7.5
2568 Male, age 61, both hemispheres 7.3
1956 Male, age 74, unknown 7.2
2284 Female, age 91, both hemispheres 7.2
2292 Female, age 85, both hemispheres 7.0
2196 Female, age 79, unknown 6.8
2645 Female, age 72, unknown 6.6
Globus pallidus, externus
nTPM: 6.2
2395 Male, age 75, both hemispheres 6.5
2772 Female, age 79, unknown 6.5
1996 Male, age 80, right hemisphere 6.1
2567 Female, age 72, unknown 6.1
2646 Male, age 61, right hemisphere 5.8
Globus pallidus, internus
nTPM: 6.4
2287 Male, age 75, right hemisphere 7.4
2111 Female, age 85, right hemisphere 6.9
2483 Female, age 94, right hemisphere 6.8
2778 Female, age 91, both hemispheres 6.5
2566 Female, age 72, unknown 6.1
1818 Male, age 74, unknown 5.8
2037 Male, age 80, right hemisphere 5.5
Nucleus accumbens
nTPM: 7.1
1856 Female, age 91, right hemisphere 8.0
1783 Male, age 74, unknown 7.6
2824 Male, age 61, right hemisphere 7.6
1806 Female, age 85, left hemisphere 7.2
2286 Male, age 75, left hemisphere 7.0
2391 Female, age 94, left hemisphere 6.9
2698 Female, age 72, unknown 6.8
2732 Male, age 80, right hemisphere 6.1
Nucleus basalis of Meynert
nTPM: 6.6
2393 Male, age 80, right hemisphere 7.2
2484 Female, age 94, left hemisphere 7.0
2821 Male, age 75, both hemispheres 6.4
2569 Male, age 61, both hemispheres 5.8
Nucleus of the diagonal band
nTPM: 6.8
2029 Male, age 61, right hemisphere 7.4
2775 Male, age 80, right hemisphere 7.1
1812 Female, age 91, both hemispheres 6.7
1979 Male, age 74, unknown 6.4
2195 Female, age 85, both hemispheres 6.4
Olfactory tubercle
nTPM: 7.3
1998 Female, age 91, both hemispheres 8.0
2487 Female, age 94, left hemisphere 7.1
2856 Male, age 75, right hemisphere 7.1
1846 Male, age 80, right hemisphere 6.8
Putamen
nTPM: 7.5
2466 Female, age 79, unknown 8.7
1829 Male, age 74, unknown 8.3
1838 Male, age 80, right hemisphere 7.9
1937 Female, age 91, right hemisphere 7.1
2489 Female, age 72, unknown 7.0
2482 Female, age 94, left hemisphere 6.8
2647 Male, age 75, left hemisphere 6.4
Septal nuclei
nTPM: 6.5
1960 Male, age 74, unknown 7.0
2009 Female, age 91, both hemispheres 6.9
2059 Female, age 85, both hemispheres 6.7
2031 Female, age 72, unknown 6.6
2629 Female, age 94, right hemisphere 6.6
2394 Male, age 61, left hemisphere 5.7
2199 Male, age 80, right hemisphere 5.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.0
Samples: 246

Max nTPM: 22.5
Min nTPM: 3.4
Std nTPM: 3.1
Median nTPM: 9.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 22.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 22.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 20.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 18.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 18.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 18.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 17.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 17.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 16.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 16.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 15.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 15.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 15.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 15.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 15.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 15.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 14.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 14.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 14.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 14.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 14.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 14.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 13.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 13.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 13.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 13.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 13.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 13.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 13.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 13.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 13.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 13.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 13.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 13.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 13.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 13.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 13.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 13.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 13.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 13.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 13.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 13.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 13.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 13.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 12.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 12.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 12.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 12.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 12.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 12.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 12.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 12.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 12.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 12.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 12.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 12.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 12.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 12.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 12.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 12.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 12.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 12.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 11.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 11.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 11.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 11.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 11.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 11.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 11.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 11.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 11.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 11.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 11.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 11.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 11.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 11.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 11.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 11.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 11.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 11.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 11.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 10.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 10.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 10.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 10.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 10.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 10.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 10.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 10.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 10.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 10.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 10.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 10.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 10.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 10.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 10.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 10.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 10.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 10.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 10.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 10.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 10.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 10.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 10.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 10.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 10.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 10.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 10.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 10.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 10.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 10.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 10.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 10.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 10.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 10.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 9.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 9.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 9.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 9.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 9.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 9.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 9.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 9.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 9.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 9.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 9.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 9.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 9.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 9.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 9.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 9.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 9.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 9.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 9.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 9.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 9.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 9.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 9.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 9.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 9.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 9.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 9.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 9.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 9.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 9.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 9.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 8.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 8.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 8.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 8.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 8.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 8.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 8.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 8.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 8.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 8.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 8.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 8.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 8.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 8.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 8.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 8.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 8.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 8.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 8.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 8.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 8.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 8.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 8.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 8.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 7.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 7.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 7.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 7.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 7.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 7.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 7.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 7.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 7.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 7.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 7.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 7.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 7.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 7.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 7.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 7.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 7.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 7.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 7.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 7.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 7.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 7.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 6.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 6.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 6.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 6.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 6.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 6.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 6.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 6.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 6.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 6.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 6.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 6.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 6.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 6.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 6.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 6.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 6.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 6.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 6.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 6.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 6.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 6.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 6.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 5.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 5.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 5.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 5.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 5.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 5.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 4.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 4.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 11.0
Samples: 246

Max nTPM: 19.1
Min nTPM: 4.3
Std nTPM: 3.0
Median nTPM: 11.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 19.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 18.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 18.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 17.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 17.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 17.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 17.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 17.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 16.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 16.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 16.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 16.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 16.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 16.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 16.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 16.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 16.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 16.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 15.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 15.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 15.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 15.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 15.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 15.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 15.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 15.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 15.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 15.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 14.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 14.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 14.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 14.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 14.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 14.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 14.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 14.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 14.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 14.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 14.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 14.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 13.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 13.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 13.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 13.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 13.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 13.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 13.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 13.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 13.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 13.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 13.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 13.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 13.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 13.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 13.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 13.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 13.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 13.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 13.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 13.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 13.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 13.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 13.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 12.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 12.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 12.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 12.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 12.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 12.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 12.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 12.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 12.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 12.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 12.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 12.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 12.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 12.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 12.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 12.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 12.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 12.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 12.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 12.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 12.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 12.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 12.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 11.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 11.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 11.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 11.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 11.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 11.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 11.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 11.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 11.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 11.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 11.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 11.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 11.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 11.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 11.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 11.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 11.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 11.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 11.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 11.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 11.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 11.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 11.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 11.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 11.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 11.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 11.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 11.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 11.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 11.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 11.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 11.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 11.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 11.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 11.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 11.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 11.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 11.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 11.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 10.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 10.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 10.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 10.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 10.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 10.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 10.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 10.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 10.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 10.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 10.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 10.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 10.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 10.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 10.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 10.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 9.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 9.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 9.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 9.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 9.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 9.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 9.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 9.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 9.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 9.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 9.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 9.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 9.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 9.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 9.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 9.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 9.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 9.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 9.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 9.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 9.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 9.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 9.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 9.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 9.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 9.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 9.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 9.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 9.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 8.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 8.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 8.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 8.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 8.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 8.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 8.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 8.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 8.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 8.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 8.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 8.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 8.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 8.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 8.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 8.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 8.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 8.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 8.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 8.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 8.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 8.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 8.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 8.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 7.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 7.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 7.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 7.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 7.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 7.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 7.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 7.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 7.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 7.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 7.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 7.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 7.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 7.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 7.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 6.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 6.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 6.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 6.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 6.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 6.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 6.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 6.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 6.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 6.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 6.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 6.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 6.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 6.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 6.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 6.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 5.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 5.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 5.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 5.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 5.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 4.3
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Brain - Putamen (basal ganglia)
Average nTPM: 11.7
Samples: 205

Max nTPM: 26.6
Min nTPM: 4.0
Std nTPM: 3.9
Median nTPM: 11.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 26.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 22.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 22.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 21.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 20.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 20.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 20.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 20.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 18.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 18.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 18.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 18.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 18.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 17.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 17.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 17.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 17.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 17.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 17.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 16.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 16.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 16.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 16.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 16.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 15.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 15.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 15.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 15.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 15.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 15.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 15.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 15.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 15.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 15.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 15.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 15.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 14.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 14.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 14.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 14.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 14.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 14.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 14.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 14.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 14.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 14.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 14.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 14.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 14.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 14.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 14.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 14.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 14.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 14.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 14.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 14.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 14.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 13.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 13.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 13.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 13.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 13.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 13.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 13.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 13.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 13.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 13.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 13.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 13.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 12.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 12.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 12.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 12.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 12.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 12.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 12.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 12.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 12.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 12.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 12.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 12.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 12.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 12.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 12.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 12.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 12.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 12.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 12.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 11.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 11.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 11.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 11.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 11.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 11.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 11.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 11.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 11.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 11.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 11.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 11.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 11.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 11.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 10.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 10.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 10.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 10.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 10.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 10.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 10.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 10.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 10.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 10.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 10.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 10.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 10.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 10.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 10.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 10.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 10.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 9.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 9.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 9.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 9.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 9.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 9.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 8.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 8.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 8.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 8.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 8.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 8.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 8.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 8.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 8.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 8.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 8.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 7.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 7.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 7.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 7.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 7.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 6.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 6.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 6.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 6.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 5.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 5.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 5.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 4.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 4.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 4.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 4.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 4.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 35.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 24.9
FF:10164-103B2 76 years, female 24.9
Globus pallidus
Scaled Tags Per Million: 25.7
FF:10175-103C4 60 years, female 26.8
FF:10161-103A8 76 years, female 24.7
Nucleus accumbens
Scaled Tags Per Million: 35.4
FF:10037-101F1 23-56 years, mixed 35.4
Putamen
Scaled Tags Per Million: 29.3
FF:10176-103C5 60 years, female 29.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 15.1
Pig sample Sample description nTPM
Caudate
nTPM: 13.3
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 13.1
Sample C Male 14.3
Sample D Male 14.6
Putamen
nTPM: 15.1
Samples: 4

Max nTPM: 19.6
Min nTPM: 11.6
Sample A Female 11.6
Sample B Female 13.7
Sample C Male 19.6
Sample D Male 15.6
Septum
nTPM: 13.0
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.6
Sample A Female 12.7
Sample B Female 13.2
Sample C Male 14.5
Sample D Male 11.6
Ventral pallidum
nTPM: 13.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.6
Sample A Female 12.6
Sample B Female 13.6
Sample C Male 15.0
Sample D Male 12.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 31.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 31.8
Samples: 4

Max nTPM: 33.0
Min nTPM: 30.9
Sample A Male 32.1
Sample B Male 33.0
Sample C Female 30.9
Sample D Female 31.1
Septum
nTPM: 24.6
Samples: 4

Max nTPM: 26.5
Min nTPM: 23.6
Sample A Male 24.4
Sample B Male 26.5
Sample C Female 23.6
Sample D Female 23.9
Ventral forebrain
nTPM: 30.5
Samples: 4

Max nTPM: 31.5
Min nTPM: 29.8
Sample A Male 31.5
Sample B Male 30.2
Sample C Female 29.8
Sample D Female 30.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.7
69526761 Antisense, RP_050421_01_E11, Mouse strain C57BL/6J (56 days, male) 1.7
Pallidum
Expression energy: 0.8
69526761 Antisense, RP_050421_01_E11, Mouse strain C57BL/6J (56 days, male) 0.8

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