HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.3 nTPM
HPA:7.3 nTPM
GTEx:8.8 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:15.1 nTPM
Mouse:29.5 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063900
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.3
Sample id Sample description nTPM
Hippocampus
nTPM: 6.3
2148 Female, age 91, left hemisphere 6.9
1898 Male, age 80, left hemisphere 6.6
1855 Male, age 76, left hemisphere 6.4
2621 Female, age 67, right hemisphere 6.2
2529 Female, age 94, left hemisphere 6.0
1911 Female, age 85, right hemisphere 5.5
Dentate gyrus
nTPM: 6.4
1927 Female, age 91, both hemispheres 7.1
2531 Female, age 67, both hemispheres 6.9
2528 Male, age 74, both hemispheres 6.6
2010 Male, age 76, both hemispheres 6.1
2246 Female, age 85, both hemispheres 6.1
2530 Female, age 94, left hemisphere 5.9
Entorhinal gyrus
nTPM: 6.9
2764 Male, age 80, right hemisphere 7.6
2613 Female, age 94, left hemisphere 7.5
1938 Female, age 85, left hemisphere 7.0
2686 Male, age 75, right hemisphere 6.7
1787 Male, age 76, left hemisphere 6.4
2117 Female, age 91, right hemisphere 6.2
Hippocampus, CA1
nTPM: 6.9
2045 Male, age 76, both hemispheres 7.7
2749 Male, age 80, left hemisphere 7.7
1873 Female, age 85, both hemispheres 6.7
2082 Female, age 91, right hemisphere 6.2
2527 Male, age 74, both hemispheres 6.2
Hippocampus, CA2
nTPM: 6.4
1892 Male, age 76, both hemispheres 7.3
1963 Male, age 80, left hemisphere 7.3
2437 Female, age 94, left hemisphere 6.4
2113 Female, age 91, right hemisphere 5.9
2249 Male, age 74, both hemispheres 5.9
1940 Female, age 85, left hemisphere 5.7
Hippocampus, CA3
nTPM: 7.3
2436 Male, age 74, both hemispheres 8.0
2620 Female, age 94, left hemisphere 7.8
2137 Male, age 80, left hemisphere 7.6
1867 Male, age 76, both hemispheres 7.5
2861 Female, age 67, both hemispheres 6.6
1891 Female, age 85, both hemispheres 6.0
Parahippocampal cortex
nTPM: 6.7
1850 Male, age 80, both hemispheres 7.4
2532 Female, age 72, left hemisphere 7.3
1990 Female, age 91, right hemisphere 7.1
1933 Female, age 85, both hemispheres 6.9
2250 Female, age 67, right hemisphere 6.6
2245 Female, age 91, both hemispheres 6.5
2692 Male, age 74, both hemispheres 6.4
2018 Male, age 76, both hemispheres 6.1
2622 Female, age 67, right hemisphere 6.0
2693 Female, age 94, both hemispheres 6.0
Perirhinal gyrus
nTPM: 7.2
1847 Female, age 91, left hemisphere 7.5
1794 Male, age 80, right hemisphere 7.4
1841 Female, age 85, right hemisphere 7.1
2848 Male, age 76, right hemisphere 7.0
2521 Female, age 94, right hemisphere 6.9
Subiculum
nTPM: 6.2
1977 Female, age 85, both hemispheres 6.9
1901 Male, age 80, both hemispheres 6.7
2042 Male, age 76, both hemispheres 6.1
2729 Female, age 91, right hemisphere 6.1
2619 Male, age 74, both hemispheres 5.7
2438 Female, age 94, left hemisphere 5.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 20.7
Min nTPM: 3.2
Std nTPM: 2.7
Median nTPM: 8.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 16.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 15.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 14.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 14.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 14.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 13.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 13.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 13.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.8
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 16.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.4
Sample A Female 16.0
Sample B Female 16.1
Sample C Male 13.4
Sample D Male 13.9
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.1
Min nTPM: 14.0
Sample A Female 16.1
Sample B Female 15.5
Sample C Male 14.0
Sample D Male 14.7
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.1
Sample A Female 16.2
Sample B Female 13.5
Sample C Male 12.9
Sample D Male 12.1
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 16.7
Min nTPM: 11.5
Sample A Female 13.4
Sample B Female 11.5
Sample C Male 16.1
Sample D Male 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 31.4
Min nTPM: 26.0
Sample A Male 28.9
Sample B Male 31.4
Sample C Female 29.6
Sample D Female 26.0
Hippocampal formation
nTPM: 29.5
Samples: 4

Max nTPM: 32.0
Min nTPM: 27.4
Sample A Male 32.0
Sample B Male 29.4
Sample C Female 27.4
Sample D Female 29.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69526761 Antisense, RP_050421_01_E11, Mouse strain C57BL/6J (56 days, male) 2.2

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