We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
B4GALT1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • B4GALT1
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:28.1 nTPM
HPA:20.9 nTPM
GTEx:28.1 nTPM
FANTOM5:74.6 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA010806Antibody HPA010807
Glandular cells LowHigh





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 20.9
overview
Male, age 65
Small intestine sample 232
nTPM: 18.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 17.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 24.3
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 23.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 28.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 28.1
Samples: 187

Max nTPM: 57.6
Min nTPM: 8.2
Std nTPM: 9.2
Median nTPM: 27.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 57.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 56.3
GTEX-ZTSS-0926-SM-59865 40-49 years, male 53.8
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 53.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 53.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 52.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 51.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 50.3
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 49.3
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 45.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 44.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 44.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 44.2
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 43.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 42.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 42.9
GTEX-14PK6-1626-SM-6871I 70-79 years, female 41.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 40.8
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 40.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 40.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 39.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 38.7
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 38.4
GTEX-14PKU-1626-SM-6871C 40-49 years, female 38.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 37.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 37.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 37.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 36.9
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 36.9
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 36.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 36.3
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 36.0
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 35.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 34.9
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 34.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 34.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 34.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 34.3
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 33.9
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 32.9
GTEX-1C475-1426-SM-793CH 40-49 years, female 32.7
GTEX-YFCO-1326-SM-664NV 40-49 years, male 32.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 32.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 32.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 32.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 32.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 32.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 32.0
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 31.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 31.9
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 31.4
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 31.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 31.0
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 31.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 31.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 30.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 30.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 30.6
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 30.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 30.4
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 30.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 30.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 30.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 30.1
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 30.0
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 29.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 29.9
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 29.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 29.8
GTEX-111YS-1426-SM-5GID8 60-69 years, male 29.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 29.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 29.3
GTEX-14PN3-2026-SM-68729 60-69 years, female 29.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 29.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 29.2
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 29.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 28.6
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 28.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 28.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 28.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 28.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 28.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 28.1
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 28.1
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 28.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 27.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 27.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 27.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 27.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 27.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 27.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 27.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 27.2
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 27.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 27.2
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 27.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 27.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 26.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 26.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 26.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 26.7
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 26.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 26.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 26.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 26.6
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 26.6
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 26.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 26.2
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 26.2
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 26.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 25.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 25.7
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 25.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 25.4
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 24.9
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 24.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 24.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 24.7
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 24.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 24.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 24.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 24.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 24.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 24.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 24.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 24.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 23.9
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 23.8
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 23.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 23.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 23.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 23.1
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 23.1
GTEX-1192X-2526-SM-59868 50-59 years, male 22.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 22.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 22.9
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 22.8
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 22.6
GTEX-13111-1426-SM-5DUW3 50-59 years, male 22.6
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 22.2
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 22.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 22.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 21.7
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 21.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 21.3
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 20.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 20.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 20.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 20.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 20.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 20.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 20.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 20.3
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 19.8
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 19.7
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 19.5
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 19.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 19.3
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 19.3
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 18.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 18.8
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 18.7
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 18.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 18.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 17.8
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 17.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 17.7
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 17.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 17.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 17.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 16.8
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 16.7
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 16.6
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 16.5
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 15.9
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 15.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 15.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 15.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 14.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 13.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 12.9
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 12.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 12.1
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 11.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 11.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 9.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 8.2
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 74.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 74.6
FF:10024-101D6 15,40,85 years, mixed 74.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.