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LGALS1
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:593.8 nTPM
HPA:593.8 nTPM
GTEx:1437.2 nTPM
FANTOM5:505.5 Scaled Tags Per Million
Pig:1649.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 593.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 563.9
1981 Female, age 72, midline 624.0
2816 Male, age 47, midline 575.9
2194 Female, age 79, both hemispheres 557.8
2048 Male, age 55, midline 531.9
2565 Male, age 75, midline 529.7
Cervical spinal cord, dorsal horn
nTPM: 590.1
2296 Male, age 66, both hemispheres 809.3
2173 Female, age 72, unknown 713.4
2069 Male, age 47, both hemispheres 570.3
1877 Male, age 55, unknown 520.3
2721 Male, age 90, both hemispheres 478.0
2297 Male, age 75, both hemispheres 449.4
Cervical spinal cord, ventral horn
nTPM: 593.8
2098 Female, age 72, unknown 770.5
2809 Male, age 90, both hemispheres 577.8
2480 Male, age 75, both hemispheres 573.4
2068 Male, age 55, unknown 559.2
2820 Female, age 79, both hemispheres 558.0
2295 Male, age 66, both hemispheres 524.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1437.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1437.2
Samples: 159

Max nTPM: 4126.9
Min nTPM: 443.2
Std nTPM: 561.9
Median nTPM: 1348.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 4126.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 3035.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 3000.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 2727.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2690.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 2560.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2534.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2533.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2528.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2411.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2408.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2403.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2259.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2259.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 2253.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2246.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 2167.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 2149.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2100.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 2080.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 2078.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 2051.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 2047.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2045.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 2035.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 2026.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1985.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1954.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1947.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1863.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1839.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1834.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1795.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1794.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1777.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1766.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1755.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1751.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1749.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1718.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1707.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1703.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1663.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1622.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1587.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1582.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1576.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1569.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1564.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1558.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1542.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1526.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1519.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1514.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1507.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1504.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1504.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1495.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1489.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1485.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1482.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1478.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1475.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1475.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1462.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1446.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1444.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1443.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1440.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1413.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1412.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1393.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1384.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1375.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1372.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1371.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1368.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1363.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1362.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1348.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1344.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1337.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1336.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1330.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1315.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1314.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1313.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1312.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1309.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1305.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1281.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1244.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1230.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1225.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1219.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1215.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1210.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1208.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1205.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1201.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1196.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1192.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1184.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1181.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1166.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1150.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1149.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1148.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1148.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1143.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1139.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1128.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1110.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1105.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1096.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1087.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1086.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1082.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1080.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1064.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1059.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1057.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1047.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1039.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1022.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1016.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 995.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 967.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 951.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 936.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 934.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 929.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 923.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 902.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 894.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 879.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 871.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 870.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 870.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 867.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 862.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 862.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 848.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 826.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 823.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 823.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 823.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 809.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 794.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 781.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 735.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 656.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 630.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 628.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 610.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 557.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 523.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 493.8
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 443.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 505.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 505.5
FF:10181-103D1 60 years, female 738.0
FF:10159-103A6 76 years, female 273.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1649.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 1111.5
Samples: 4

Max nTPM: 1729.8
Min nTPM: 612.1
Sample A Female 612.1
Sample B Female 1275.0
Sample C Male 1729.8
Sample D Male 829.1
Ventral spinal cord
nTPM: 1649.6
Samples: 4

Max nTPM: 2065.1
Min nTPM: 1259.0
Sample A Female 1259.0
Sample B Female 2065.1
Sample C Male 1655.2
Sample D Male 1619.2

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