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SNU13
COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
RNA expressioni
Consensus:78.5 nTPM
HPA:78.5 nTPM
GTEx:32.6 nTPM
FANTOM5:101.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA029199
Endothelial cells Not detected
Glandular cells Medium


COLON - HPA RNA-seqi
Average nTPM 78.5
overview Male, age 54 Colon sample 67
nTPM: 61.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 85.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 90.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 54.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 96.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 91.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 90.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 77.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 65.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 94.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 71.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 71.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 68.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 32.7
Samples: 373

Max nTPM: 89.4
Min nTPM: 12.1
Std nTPM: 10.2
Median nTPM: 31.3
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 89.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 83.9
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 82.9
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 77.8
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 69.4
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 60.8
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 60.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 59.8
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 57.9
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 57.1
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 56.7
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Colon - Transverse
Average nTPM: 32.4
Samples: 406

Max nTPM: 143.1
Min nTPM: 10.3
Std nTPM: 11.1
Median nTPM: 31.5
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 143.1
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 77.9
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 67.9
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 67.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 64.3
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 63.7
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 61.3
GTEX-14PK6-1726-SM-6871J 70-79 years, female 59.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 58.7
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 56.5
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 53.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 101.5
FF:10014-101C5 62,83,84 years, mixed 101.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.