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MICALL1
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:14.8 nTPM
HPA:14.8 nTPM
GTEx:5.7 nTPM
FANTOM5:39.8 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:13.7 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043480
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 14.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.3
2289 Male, age 61, right hemisphere 4.9
1854 Male, age 80, left hemisphere 4.8
2481 Female, age 94, left hemisphere 4.7
2288 Male, age 75, left hemisphere 4.6
1781 Male, age 74, unknown 4.5
2290 Female, age 72, unknown 4.1
2846 Female, age 79, unknown 3.9
1857 Female, age 85, left hemisphere 3.1
Claustrum
nTPM: 6.7
2292 Female, age 85, both hemispheres 12.9
1956 Male, age 74, unknown 7.9
2196 Female, age 79, unknown 7.1
2198 Male, age 80, both hemispheres 5.7
2491 Male, age 75, both hemispheres 5.6
2568 Male, age 61, both hemispheres 5.3
2645 Female, age 72, unknown 5.3
2284 Female, age 91, both hemispheres 5.2
2392 Female, age 94, both hemispheres 4.9
Globus pallidus, externus
nTPM: 14.8
2567 Female, age 72, unknown 21.5
2646 Male, age 61, right hemisphere 15.4
2772 Female, age 79, unknown 13.3
1996 Male, age 80, right hemisphere 12.5
2395 Male, age 75, both hemispheres 11.4
Globus pallidus, internus
nTPM: 14.4
2111 Female, age 85, right hemisphere 23.4
2566 Female, age 72, unknown 19.0
2778 Female, age 91, both hemispheres 14.9
2037 Male, age 80, right hemisphere 12.3
2287 Male, age 75, right hemisphere 12.3
1818 Male, age 74, unknown 11.8
2483 Female, age 94, right hemisphere 7.5
Nucleus accumbens
nTPM: 5.8
2698 Female, age 72, unknown 7.8
2732 Male, age 80, right hemisphere 7.8
2391 Female, age 94, left hemisphere 7.5
2824 Male, age 61, right hemisphere 5.8
1783 Male, age 74, unknown 4.9
1806 Female, age 85, left hemisphere 4.7
2286 Male, age 75, left hemisphere 4.7
1856 Female, age 91, right hemisphere 3.2
Nucleus basalis of Meynert
nTPM: 8.4
2569 Male, age 61, both hemispheres 14.8
2821 Male, age 75, both hemispheres 7.3
2484 Female, age 94, left hemisphere 6.1
2393 Male, age 80, right hemisphere 5.3
Nucleus of the diagonal band
nTPM: 3.1
1979 Male, age 74, unknown 4.5
1812 Female, age 91, both hemispheres 3.5
2195 Female, age 85, both hemispheres 2.9
2029 Male, age 61, right hemisphere 2.6
2775 Male, age 80, right hemisphere 1.9
Olfactory tubercle
nTPM: 2.6
2487 Female, age 94, left hemisphere 2.9
2856 Male, age 75, right hemisphere 2.8
1846 Male, age 80, right hemisphere 2.5
1998 Female, age 91, both hemispheres 2.4
Putamen
nTPM: 5.4
2647 Male, age 75, left hemisphere 9.2
2489 Female, age 72, unknown 6.7
1829 Male, age 74, unknown 5.7
2482 Female, age 94, left hemisphere 5.1
1937 Female, age 91, right hemisphere 4.6
1838 Male, age 80, right hemisphere 3.7
2466 Female, age 79, unknown 3.2
Septal nuclei
nTPM: 4.6
2394 Male, age 61, left hemisphere 8.9
2059 Female, age 85, both hemispheres 6.1
2199 Male, age 80, right hemisphere 6.0
2629 Female, age 94, right hemisphere 3.5
1960 Male, age 74, unknown 2.8
2009 Female, age 91, both hemispheres 2.7
2031 Female, age 72, unknown 1.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 5.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 4.6
Samples: 246

Max nTPM: 11.2
Min nTPM: 1.3
Std nTPM: 1.4
Median nTPM: 4.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 11.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 9.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 9.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 8.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 8.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 8.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 7.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 7.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 7.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 7.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 7.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 7.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 7.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 7.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 7.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 7.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 6.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 6.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 6.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 6.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 6.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 6.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 6.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 6.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 6.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 6.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 6.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 6.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 6.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 6.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 6.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 6.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 6.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 6.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 6.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 5.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 5.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 5.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 5.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 5.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 5.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 5.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 5.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 5.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 5.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 5.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 5.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 5.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 5.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 5.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 5.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 5.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 5.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 5.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 5.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 5.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 5.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 5.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 5.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 5.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 5.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 5.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 5.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 5.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 5.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 5.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 5.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 4.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 4.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 4.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 4.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 4.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 4.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 4.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 4.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 4.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 4.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 4.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 4.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 4.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 4.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 4.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 4.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 4.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 4.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 4.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 4.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 4.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 4.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 4.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 4.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 4.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 4.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 4.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 4.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 4.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 4.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 4.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 4.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 4.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 4.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 4.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 4.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 4.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 4.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 4.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 4.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 4.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 4.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 4.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 4.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 4.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 4.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 4.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 4.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 4.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 4.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 4.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 4.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 4.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 4.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 4.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 4.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 4.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 4.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 4.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 4.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 4.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 4.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 4.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 4.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 4.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 4.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 4.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 4.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 3.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 3.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 3.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 3.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 3.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 3.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 3.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 3.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 3.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 3.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 3.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 3.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 3.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 3.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 3.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 3.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 3.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 3.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 3.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 3.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 3.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 3.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 3.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 3.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 3.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 3.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 3.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 3.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 3.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 3.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 3.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 3.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 3.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 3.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 3.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 3.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 3.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 3.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 3.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 3.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 3.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 3.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 3.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 3.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 3.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 3.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 2.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 2.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 2.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 2.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 2.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 2.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 2.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 2.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 2.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 2.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 4.5
Samples: 246

Max nTPM: 16.2
Min nTPM: 1.5
Std nTPM: 2.0
Median nTPM: 4.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 16.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 14.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 14.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 12.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 11.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 10.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 10.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 9.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 9.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 8.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 8.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 8.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 8.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 8.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 7.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 7.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 7.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 7.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 7.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 7.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 7.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 7.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 7.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 7.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 6.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 6.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 6.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 6.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 6.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 6.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 6.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 6.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 6.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 6.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 6.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 6.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 5.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 5.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 5.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 5.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 5.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 5.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 5.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 5.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 5.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 5.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 5.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 5.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 5.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 5.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 5.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 5.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 5.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 5.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 5.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 5.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 5.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 5.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 5.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 5.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 5.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 5.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 4.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 4.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 4.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 4.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 4.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 4.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 4.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 4.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 4.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 4.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 4.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 4.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 4.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 4.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 4.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 4.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 4.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 4.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 4.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 4.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 4.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 4.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 4.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 4.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 4.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 4.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 4.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 4.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 4.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 4.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 4.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 4.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 4.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 4.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 4.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 4.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 4.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 4.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 4.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 4.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 4.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 4.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 4.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 4.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 4.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 4.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 4.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 4.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 4.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 4.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 4.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 4.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 4.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 4.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 4.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 4.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 4.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 4.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 4.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 4.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 4.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 3.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 3.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 3.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 3.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 3.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 3.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 3.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 3.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 3.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 3.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 3.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 3.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 3.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 3.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 3.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 3.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 3.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 3.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 3.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 3.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 3.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 3.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 3.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 3.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 3.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 3.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 3.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 3.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 3.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 3.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 3.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 3.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 3.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 3.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 3.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 3.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 3.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 3.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 3.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 3.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 3.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 3.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 3.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 3.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 3.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 3.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 3.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 3.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 3.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 3.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 3.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 3.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 3.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 3.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 3.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 3.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 3.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 3.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 3.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 3.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 3.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 3.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 3.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 3.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 3.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 3.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 3.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 3.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 3.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 3.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 3.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 3.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 3.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 3.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 3.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 3.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 3.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 3.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 2.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 2.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 2.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 2.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 2.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 2.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 2.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 2.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 2.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 2.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 2.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 2.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 2.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 2.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 2.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 2.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 2.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 2.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 2.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 2.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 2.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 2.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 2.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 2.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 2.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 2.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 2.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 2.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 2.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1.5
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Brain - Putamen (basal ganglia)
Average nTPM: 5.7
Samples: 205

Max nTPM: 20.7
Min nTPM: 2.5
Std nTPM: 2.3
Median nTPM: 5.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 20.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 15.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 14.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 10.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 10.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 10.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 10.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 9.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 9.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 9.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 9.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 9.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 9.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 8.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 8.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 8.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 7.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 7.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 7.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 7.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 7.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 7.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 7.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 7.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 7.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 7.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 7.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 7.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 7.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 6.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 6.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 6.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 6.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 6.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 6.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 6.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 6.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 6.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 6.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 6.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 6.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 6.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 6.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 6.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 6.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 6.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 6.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 6.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 6.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 6.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 6.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 6.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 5.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 5.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 5.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 5.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 5.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 5.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 5.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 5.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 5.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 5.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 5.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 5.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 5.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 5.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 5.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 5.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 5.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 5.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 5.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 5.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 5.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 5.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 5.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 5.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 5.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 5.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 5.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 5.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 5.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 5.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 5.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 5.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 5.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 5.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 5.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 5.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 5.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 5.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 5.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 5.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 5.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 5.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 5.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 5.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 5.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 5.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 5.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 5.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 5.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 5.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 4.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 4.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 4.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 4.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 4.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 4.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 4.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 4.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 4.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 4.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 4.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 4.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 4.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 4.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 4.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 4.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 4.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 4.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 4.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 4.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 4.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 4.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 4.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 4.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 4.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 4.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 4.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 4.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 4.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 4.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 4.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 4.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 4.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 4.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 4.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 4.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 4.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 4.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 4.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 3.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 3.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 3.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 3.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 3.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 3.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 3.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 3.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 3.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 3.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 3.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 3.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 3.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 3.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 3.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 3.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 3.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 3.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 3.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 3.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 2.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 2.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 2.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 2.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 39.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 13.2
FF:10164-103B2 76 years, female 13.2
Globus pallidus
Scaled Tags Per Million: 39.8
FF:10175-103C4 60 years, female 41.8
FF:10161-103A8 76 years, female 37.9
Nucleus accumbens
Scaled Tags Per Million: 20.0
FF:10037-101F1 23-56 years, mixed 20.0
Putamen
Scaled Tags Per Million: 11.8
FF:10176-103C5 60 years, female 11.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 13.4
Pig sample Sample description nTPM
Caudate
nTPM: 6.7
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.4
Sample A Female 5.4
Sample B Female 6.7
Sample C Male 7.4
Sample D Male 7.2
Putamen
nTPM: 12.2
Samples: 4

Max nTPM: 17.5
Min nTPM: 7.5
Sample A Female 17.5
Sample B Female 7.5
Sample C Male 8.0
Sample D Male 15.7
Septum
nTPM: 9.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.8
Sample A Female 8.0
Sample B Female 7.8
Sample C Male 10.9
Sample D Male 10.3
Ventral pallidum
nTPM: 13.5
Samples: 4

Max nTPM: 23.0
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 8.5
Sample C Male 23.0
Sample D Male 16.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 13.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 13.7
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.6
Sample A Male 14.1
Sample B Male 15.9
Sample C Female 11.6
Sample D Female 13.2
Septum
nTPM: 12.4
Samples: 4

Max nTPM: 16.8
Min nTPM: 9.5
Sample A Male 10.6
Sample B Male 9.5
Sample C Female 12.5
Sample D Female 16.8
Ventral forebrain
nTPM: 10.7
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.7
Sample A Male 12.0
Sample B Male 9.8
Sample C Female 8.7
Sample D Female 12.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
71152294 Antisense, RP_050719_03_F11, Mouse strain C57BL/6J (56 days, male) 0.4
74076240 Antisense, RP_051219_03_A08, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.2
71152294 Antisense, RP_050719_03_F11, Mouse strain C57BL/6J (56 days, male) 0.2
74076240 Antisense, RP_051219_03_A08, Mouse strain C57BL/6J (56 days, male) 0.1

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