EMD

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:13.8 FPKM
GTEx:38.8 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA000609

 

Antibody CAB001545

 

Antibody CAB002029

 

Antibody CAB062552

 

Adipocytes

Not available   Not detected   Not detected   Not available  

Chondrocytes

Not available   Medium   Not available   Not available  

Fibroblasts

Low   Not detected   Not detected   Not detected  

Peripheral nerve

Not available   Not available   Not available   Not available  
       
       
       

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not available
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA000609

 

Antibody CAB001545

 

Antibody CAB002029

 

Antibody CAB062552

 

Adipocytes

Low   Not detected   Not detected   Not detected  

Chondrocytes

Not available   Not available   Not available   Not available  

Fibroblasts

Low   Not detected   Not available   Not detected  

Peripheral nerve

Low   Not detected   Low   Not detected  
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

13.8

N/A Female, age 80
Sample 1
FPKM: 22.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 10.1
N/A Female, age 57
Sample 3
FPKM: 10.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 13.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 13.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

38.8

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 38.4
Samples: 350

Max RPKM: 78.1
Min RPKM: 19.1
Std RPKM: 7.1
Median RPKM: 37.9
GTEX-OXRO-0226-SM-3LK6F 78.1
GTEX-XK95-0426-SM-4AT4R 64.1
GTEX-11P82-1726-SM-5Q5AT 61.4
GTEX-139D8-0326-SM-5IJCJ 57.9
GTEX-13RTJ-2526-SM-5S2Q3 57.7
GTEX-XQ8I-0526-SM-4BOPS 56.5
GTEX-13111-1726-SM-5EGJZ 56.5
GTEX-139YR-2426-SM-5J1OB 55.8
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 39.2
Samples: 227

Max RPKM: 81
Min RPKM: 18.1
Std RPKM: 9.9
Median RPKM: 37.8
GTEX-1117F-1326-SM-5EGHH 81.0
GTEX-13OW7-1126-SM-5K7V6 76.9
GTEX-ZYVF-1026-SM-5E44V 75.4
GTEX-ZE7O-1526-SM-5J1NH 64.5
GTEX-Y114-1326-SM-4TT9A 64.2
GTEX-ZYW4-2226-SM-5GZYG 62.8
GTEX-X585-2526-SM-4QAS1 61.4
GTEX-WWTW-1326-SM-4MVNT 60.2
Show all