CLIP1

GENERAL INFORMATION

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Gene name

CLIP1

Gene description

CAP-GLY domain containing linker protein 1

Protein class

Cancer-related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

12
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

Ubiquitous cytoplasmic expression.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 2 antibodies.
HPA026678 , CAB004399
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

CLIP1 (HGNC Symbol)

Synonyms

CLIP, CLIP-170, CLIP170, CYLN1, RSN

Description

CAP-GLY domain containing linker protein 1 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene links endocytic vesicles to microtubules. This gene is highly expressed in Reed-Sternberg cells of Hodgkin disease. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]

Chromosome

12

Cytoband

q24.31

Chromosome location (bp)

122271432 - 122422632

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000130779 (version 78.38)

Entrez gene

6249

UniProt

P30622 (UniProt - Evidence at protein level)

neXtProt

NX_P30622

Antibodypedia

CLIP1 antibodies


PROTEIN BROWSER

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ENST00000302528
 
ENST00000358808
 
ENST00000361654
 
ENST00000535290
 
ENST00000537004
 
ENST00000537178
 
ENST00000539080
 
ENST00000540304
 
ENST00000540338
 
ENST00000540539
 
ENST00000545889
 
ENST00000620786
 
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PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CLIP1-001 ENSP00000303585
ENST00000302528
P30622
Show all »
Show » Show » 1427 161 No 0
CLIP1-002 ENSP00000445531
ENST00000537178
P30622
Show all »
Show » Show » 1392 156.8 No 0
CLIP1-003 ENSP00000439093
ENST00000540338
P30622
Show all »
Show » Show » 1438 162.2 No 0
CLIP1-005 ENSP00000437786
ENST00000540304
F5H6A0
Show all »
Show » 803 89.6 No 0
CLIP1-006 ENSP00000441409
ENST00000537004
F6VGP8
Show all »
Show » 428 46.2 No 0
CLIP1-007 ENSP00000355314
ENST00000361654
J3KP58
Show all »
Show » Show » 1316 148.1 No 0
CLIP1-008 ENSP00000438743
ENST00000545889
F5H0N7
Show all »
Show » Show » 1013 116.3 No 0
CLIP1-015 ENSP00000437617
ENST00000540539
F5H6H4
Show all »
Show » Show » 117 13.5 No 0
CLIP1-016 ENSP00000445387
ENST00000539080
F5H367
Show all »
Show » 83 8.9 No 0
CLIP1-017 ENSP00000439472
ENST00000535290
F5H270
Show all »
Show » 108 11.5 No 0
CLIP1-201 ENSP00000351665
ENST00000358808
P30622
Show all »
Show » Show » 1427 161 No 0
CLIP1-202 ENSP00000479322
ENST00000620786
P30622
Show all »
Show » Show » 1438 162.2 No 0