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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
24.1
nTPM
Monaco:
247.7
nTPM
Schmiedel:
274.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.1
HPA sample
nTPM
gdT-cell nTPM: 19.0
Samples: 6
Max nTPM: 25.6
Min nTPM: 12.5
P10809_1007
19.8
P10809_1022
25.6
P10809_1041
13.2
P10809_1060
23.5
P10809_1077
19.3
P10809_1098
12.5
MAIT T-cell nTPM: 20.5
Samples: 6
Max nTPM: 32.1
Min nTPM: 15.8
P10809_1006
32.1
P10809_1024
18.7
P10809_1043
18.1
P10809_1062
18.2
P10809_1083
15.8
P10809_1097
20.3
Memory CD4 T-cell nTPM: 18.4
Samples: 6
Max nTPM: 29.0
Min nTPM: 12.0
P10809_1014
29.0
P10809_1026
16.1
P10809_1045
17.2
P10809_1064
12.0
P10809_1086
16.1
P10809_1113
20.2
Memory CD8 T-cell nTPM: 18.5
Samples: 5
Max nTPM: 34.2
Min nTPM: 5.7
P10809_1012
34.2
P10809_1027
5.7
P10809_1046
20.6
P10809_1065
10.9
P10809_1111
21.0
Naive CD4 T-cell nTPM: 19.7
Samples: 6
Max nTPM: 26.2
Min nTPM: 13.3
P10809_1015
26.2
P10809_1030
18.1
P10809_1049
13.3
P10809_1068
24.7
P10809_1085
16.2
P10809_1112
19.8
Naive CD8 T-cell nTPM: 18.5
Samples: 6
Max nTPM: 31.4
Min nTPM: 7.2
P10809_1016
31.4
P10809_1031
7.2
P10809_1050
24.9
P10809_1069
8.7
P10809_1087
17.0
P10809_1110
21.9
T-reg nTPM: 24.1
Samples: 6
Max nTPM: 34.2
Min nTPM: 8.0
P10809_1018
34.0
P10809_1037
27.6
P10809_1056
19.5
P10809_1075
8.0
P10809_1094
21.2
P10809_1106
34.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
247.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 231.4
Samples: 4
Max nTPM: 250.5
Min nTPM: 205.2
RHH5202_R3573
237.4
RHH5230_R3602
250.5
RHH5259_R3631
232.5
RHH5288_R3660
205.2
Effector memory CD8 T-cell nTPM: 219.0
Samples: 4
Max nTPM: 240.2
Min nTPM: 211.3
RHH5203_R3574
213.0
RHH5231_R3603
211.3
RHH5260_R3632
240.2
RHH5289_R3661
211.6
MAIT T-cell nTPM: 232.0
Samples: 4
Max nTPM: 295.1
Min nTPM: 178.9
RHH5233_R3605
228.4
RHH5205_R3576
295.1
RHH5262_R3634
225.4
RHH5297_R3663
178.9
Memory CD4 T-cell TFH nTPM: 200.4
Samples: 4
Max nTPM: 223.1
Min nTPM: 179.6
RHH5300_R3666
202.0
RHH5236_R3608
179.6
RHH5265_R3637
223.1
RHH5208_R3579
196.9
Memory CD4 T-cell Th1 nTPM: 207.9
Samples: 4
Max nTPM: 240.4
Min nTPM: 180.5
RHH5210_R3581
185.9
RHH5302_R3668
180.5
RHH5238_R3610
240.4
RHH5267_R3639
224.7
Memory CD4 T-cell Th1/Th17 nTPM: 237.9
Samples: 4
Max nTPM: 313.6
Min nTPM: 184.2
RHH5303_R3669
223.3
RHH5211_R3582
230.3
RHH5239_R3611
313.6
RHH5268_R3640
184.2
Memory CD4 T-cell Th17 nTPM: 238.3
Samples: 4
Max nTPM: 280.4
Min nTPM: 223.6
RHH5304_R3670
224.4
RHH5212_R3583
223.6
RHH5240_R3612
280.4
RHH5269_R3641
224.8
Memory CD4 T-cell Th2 nTPM: 217.4
Samples: 4
Max nTPM: 231.0
Min nTPM: 193.7
RHH5305_R3671
216.4
RHH5213_R3584
231.0
RHH5241_R3613
193.7
RHH5270_R3642
228.5
Naive CD4 T-cell nTPM: 203.5
Samples: 4
Max nTPM: 231.7
Min nTPM: 185.4
RHH5306_R3672
185.4
RHH5214_R3585
207.4
RHH5242_R3614
189.3
RHH5271_R3643
231.7
Naive CD8 T-cell nTPM: 203.1
Samples: 4
Max nTPM: 224.1
Min nTPM: 185.7
RHH5201_R3572
194.6
RHH5229_R3601
224.1
RHH5258_R3630
185.7
RHH5287_R3659
207.9
Non-Vd2 gdTCR nTPM: 239.2
Samples: 4
Max nTPM: 260.9
Min nTPM: 183.6
RHH5235_R3607
255.5
RHH5264_R3636
256.8
RHH5207_R3578
260.9
RHH5299_R3665
183.6
T-reg nTPM: 185.0
Samples: 4
Max nTPM: 218.1
Min nTPM: 159.7
RHH5301_R3667
159.7
RHH5237_R3609
171.9
RHH5266_R3638
218.1
RHH5209_R3580
190.2
Terminal effector memory CD4 T-cell nTPM: 245.6
Samples: 2
Max nTPM: 253.8
Min nTPM: 237.4
RHH5243_R3615
253.8
RHH5272_R3644
237.4
Terminal effector memory CD8 T-cell nTPM: 247.7
Samples: 4
Max nTPM: 285.7
Min nTPM: 193.3
RHH5232_R3604
276.0
RHH5204_R3575
193.3
RHH5261_R3633
285.7
RHH5296_R3662
235.7
Vd2 gdTCR nTPM: 236.6
Samples: 4
Max nTPM: 288.1
Min nTPM: 166.5
RHH5234_R3606
232.1
RHH5206_R3577
259.7
RHH5263_R3635
288.1
RHH5298_R3664
166.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.