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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
High
Neuronal cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
324.5
nTPM
HPA Brain:
108.7
nTPM
GTEx:
324.5
nTPM
FANTOM5:
1243.6
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA041152
Glial cells
High
Neuronal cells
High
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
108.7
Sample id
Sample description
nTPM
Hippocampus nTPM: 100.5
2529
Female, age 94, left hemisphere
130.3
1911
Female, age 85, right hemisphere
118.8
2148
Female, age 91, left hemisphere
96.5
1898
Male, age 80, left hemisphere
95.9
1855
Male, age 76, left hemisphere
91.4
2621
Female, age 67, right hemisphere
70.2
Dentate gyrus nTPM: 88.8
2528
Male, age 74, both hemispheres
157.8
2246
Female, age 85, both hemispheres
97.7
1927
Female, age 91, both hemispheres
78.6
2010
Male, age 76, both hemispheres
75.6
2530
Female, age 94, left hemisphere
73.7
2531
Female, age 67, both hemispheres
49.3
Entorhinal gyrus nTPM: 81.0
2117
Female, age 91, right hemisphere
106.9
1938
Female, age 85, left hemisphere
104.4
1787
Male, age 76, left hemisphere
83.7
2764
Male, age 80, right hemisphere
73.3
2686
Male, age 75, right hemisphere
70.5
2613
Female, age 94, left hemisphere
47.1
Hippocampus, CA1 nTPM: 94.7
2527
Male, age 74, both hemispheres
148.2
2082
Female, age 91, right hemisphere
91.7
1873
Female, age 85, both hemispheres
87.2
2045
Male, age 76, both hemispheres
74.6
2749
Male, age 80, left hemisphere
71.9
Hippocampus, CA2 nTPM: 97.6
2249
Male, age 74, both hemispheres
154.9
1940
Female, age 85, left hemisphere
91.5
2113
Female, age 91, right hemisphere
91.5
2437
Female, age 94, left hemisphere
90.7
1892
Male, age 76, both hemispheres
85.2
1963
Male, age 80, left hemisphere
71.7
Hippocampus, CA3 nTPM: 100.4
2436
Male, age 74, both hemispheres
139.5
1891
Female, age 85, both hemispheres
132.4
2137
Male, age 80, left hemisphere
97.3
2620
Female, age 94, left hemisphere
89.9
2861
Female, age 67, both hemispheres
74.2
1867
Male, age 76, both hemispheres
69.2
Parahippocampal cortex nTPM: 91.6
2692
Male, age 74, both hemispheres
122.6
2250
Female, age 67, right hemisphere
114.2
1990
Female, age 91, right hemisphere
111.1
1933
Female, age 85, both hemispheres
99.6
2622
Female, age 67, right hemisphere
91.5
1850
Male, age 80, both hemispheres
90.5
2245
Female, age 91, both hemispheres
80.1
2532
Female, age 72, left hemisphere
73.2
2018
Male, age 76, both hemispheres
70.4
2693
Female, age 94, both hemispheres
62.8
Perirhinal gyrus nTPM: 84.7
1847
Female, age 91, left hemisphere
112.9
1841
Female, age 85, right hemisphere
102.5
1794
Male, age 80, right hemisphere
99.3
2521
Female, age 94, right hemisphere
72.0
2848
Male, age 76, right hemisphere
36.9
Subiculum nTPM: 108.7
2619
Male, age 74, both hemispheres
155.6
1977
Female, age 85, both hemispheres
109.4
2438
Female, age 94, left hemisphere
108.5
2729
Female, age 91, right hemisphere
107.1
1901
Male, age 80, both hemispheres
88.5
2042
Male, age 76, both hemispheres
82.8
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
324.5
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 324.5
Samples: 197
Max nTPM: 1679.3
Min nTPM: 93.4
Std nTPM: 212.0
Median nTPM: 269.8
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
1679.3
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
1261.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
1178.4
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
1008.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
1007.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
927.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
892.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
761.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
738.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
729.1
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
700.0
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
683.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
637.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
609.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
606.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
554.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
554.5
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
552.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
549.6
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
539.6
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
539.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
519.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
518.5
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
507.1
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
503.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
486.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
485.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
484.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
480.7
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
474.6
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
472.3
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
466.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
449.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
443.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
435.8
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
435.8
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
432.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
426.7
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
422.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
421.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
420.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
419.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
411.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
409.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
396.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
392.4
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
392.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
389.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
386.2
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
382.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
376.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
376.0
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
374.7
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
364.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
364.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
361.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
354.9
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
353.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
345.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
344.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
341.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
340.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
336.5
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
331.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
328.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
326.7
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
326.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
324.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
324.0
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
322.2
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
321.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
319.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
311.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
310.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
309.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
309.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
307.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
306.0
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
305.1
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
300.8
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
299.0
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
297.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
293.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
293.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
293.2
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
292.8
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
292.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
291.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
287.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
286.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
285.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
284.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
284.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
281.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
281.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
276.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
273.5
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
271.7
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
269.8
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
268.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
268.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
268.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
264.0
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
263.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
262.0
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
257.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
256.2
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
255.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
254.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
248.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
248.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
247.7
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
246.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
245.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
243.4
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
243.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
242.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
237.5
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
236.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
236.5
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
236.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
234.4
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
233.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
232.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
231.7
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
230.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
230.0
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
227.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
226.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
226.5
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
224.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
223.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
222.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
221.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
221.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
216.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
216.0
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
216.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
214.0
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
212.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
212.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
210.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
207.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
205.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
203.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
200.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
195.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
193.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
193.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
190.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
190.1
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
188.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
187.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
186.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
186.0
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
184.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
184.5
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
182.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
181.4
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
177.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
177.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
176.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
176.4
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
175.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
175.4
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
174.4
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
173.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
172.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
170.3
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
165.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
164.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
163.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
163.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
156.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
155.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
153.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
147.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
147.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
145.1
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
144.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
142.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
139.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
133.6
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
132.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
128.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
125.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
120.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
118.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
109.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
109.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
106.3
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
101.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
100.8
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
100.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
97.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
96.2
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
93.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.