CA13

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.0 FPKM
GTEx:1.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA024689

 

Antibody CAB025567

 

Endothelial cells

Not detected   Not detected  

Glandular cells

High   High  

Peripheral nerve/ganglion

Low   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

2.0

overview Male, age 54
Sample 1
FPKM: 1.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 3.1
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 0.5
GTEX-14A5H-1626-SM-5SIAN 3.1
GTEX-11WQK-2526-SM-5CVL8 2.4
GTEX-13O1R-2426-SM-5KLZZ 2.0
GTEX-ZAJG-2626-SM-5S2NU 2.0
GTEX-YJ8A-1726-SM-5P9IQ 1.7
GTEX-11TUW-2326-SM-5EQMO 1.5
GTEX-ZYY3-2226-SM-5E45A 1.5
GTEX-ZY6K-1326-SM-5GZWP 1.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.0
Samples: 196

Max RPKM: 6.4
Min RPKM: 0.1
Std RPKM: 1.2
Median RPKM: 1.9
GTEX-1122O-1526-SM-5N9CL 6.4
GTEX-144GM-1226-SM-5LU52 6.1
GTEX-ZV7C-1526-SM-5NQ72 5.8
GTEX-14E6E-1526-SM-5RQIG 5.8
GTEX-XUZC-1326-SM-4BRV2 5.8
GTEX-132AR-2726-SM-5PNVN 4.8
GTEX-ZVP2-1526-SM-5NQ82 4.7
GTEX-ZVT2-1926-SM-5GU5T 4.6
Show all