CA13

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.1 FPKM
GTEx:3.5 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Low
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA024689

 

Antibody CAB025567

 

Fibroblasts

Not detected   Medium  

Keratinocytes

Low   Medium  

Langerhans

Low   Medium  

Melanocytes

Medium   Medium  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA024689

 

Antibody CAB025567

 

Epidermal cells

Low   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

4.1

overview Female, age 34
Sample 1
FPKM: 5.2
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 4.7
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 2.4

SKIN - GTEx RNA-seq

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Average RPKM

3.5

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 3.6
Samples: 250

Max RPKM: 7.2
Min RPKM: 1.2
Std RPKM: 1
Median RPKM: 3.6
GTEX-ZWKS-0626-SM-5GIDV 7.2
GTEX-V1D1-2026-SM-3GAF4 6.9
GTEX-X4EP-0626-SM-3P621 6.9
GTEX-13N11-2326-SM-5IJBF 6.3
GTEX-12696-0126-SM-5EQ4L 6.1
GTEX-111YS-1526-SM-5GZYW 6.0
GTEX-ZAB4-2126-SM-5HL8U 6.0
GTEX-XV7Q-1826-SM-4BRUV 5.8
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 3.5
Samples: 357

Max RPKM: 6.9
Min RPKM: 1.3
Std RPKM: 1
Median RPKM: 3.3
GTEX-VJWN-0126-SM-3GIK7 6.9
GTEX-13O3Q-2426-SM-5IJBR 6.4
GTEX-11VI4-1726-SM-5CVLH 6.3
GTEX-11GSO-2426-SM-5A5LY 6.1
GTEX-ZYFC-0226-SM-5NQ75 5.9
GTEX-Y8LW-1826-SM-5S2MV 5.9
GTEX-147GR-0526-SM-5S2MY 5.6
GTEX-11EI6-0126-SM-5985R 5.6
Show all