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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:341.9 nTPM
HPA Brain:541.1 nTPM
GTEx:341.9 nTPM
Pig:130.8 nTPM
Mouse:317.3 nTPM
Allen mouse:3.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

541.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 263.5
1961 Female, age 42, unknown 278.1
2226 Male, age 75, left hemisphere 249.0
Dorsomedial nucleus
nTPM: 427.0
1989 Male, age 62, unknown 545.3
2017 Female, age 42, unknown 379.6
2041 Female, age 72, unknown 356.0
Lateral hypothalamic area
nTPM: 484.6
2412 Male, age 62, unknown 510.0
2271 Male, age 75, both hemispheres 493.0
1791 Male, age 80, right hemisphere 470.9
2228 Male, age 66, unknown 464.7
Mammillary body
nTPM: 540.1
1834 Female, age 42, unknown 580.1
1948 Female, age 72, unknown 575.1
1923 Female, age 72, unknown 543.9
1945 Male, age 80, right hemisphere 510.3
2413 Male, age 66, unknown 490.9
Paraventricular nucleus
nTPM: 541.1
2700 Male, age 62, unknown 541.1
Preoptic area
nTPM: 424.3
2414 Female, age 72, unknown 505.5
1861 Female, age 42, unknown 439.5
1907 Male, age 80, right hemisphere 327.8
Supraoptic nucleus
nTPM: 531.0
2043 Male, age 62, unknown 589.3
1894 Female, age 72, unknown 515.6
2835 Female, age 72, unknown 488.1
Ventromedial nucleus
nTPM: 305.5
1982 Female, age 72, unknown 316.6
1822 Female, age 42, unknown 294.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

341.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 341.9
Samples: 257

Max nTPM: 1691.4
Min nTPM: 129.8
Std nTPM: 230.7
Median nTPM: 265.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1691.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1531.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1473.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1464.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1371.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1330.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1142.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1032.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 888.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 761.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 716.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 708.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 702.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 677.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 677.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 672.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 668.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 616.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 605.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 601.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 593.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 585.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 567.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 567.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 566.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 566.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 551.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 551.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 541.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 529.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 527.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 512.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 511.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 501.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 498.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 494.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 494.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 486.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 475.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 473.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 470.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 461.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 451.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 449.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 447.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 443.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 439.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 435.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 427.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 427.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 421.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 419.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 407.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 401.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 396.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 396.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 394.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 393.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 390.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 386.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 384.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 383.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 381.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 379.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 378.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 378.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 377.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 376.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 374.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 374.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 366.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 366.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 364.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 363.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 359.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 358.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 357.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 350.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 349.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 348.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 346.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 341.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 340.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 340.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 334.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 332.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 332.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 330.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 329.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 324.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 322.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 321.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 320.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 320.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 313.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 310.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 307.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 307.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 304.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 303.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 303.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 301.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 301.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 296.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 293.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 289.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 288.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 288.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 286.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 285.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 282.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 281.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 281.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 280.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 280.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 278.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 277.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 276.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 276.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 275.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 274.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 272.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 271.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 271.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 270.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 267.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 267.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 266.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 265.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 265.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 264.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 264.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 263.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 262.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 261.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 261.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 257.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 257.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 256.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 256.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 256.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 255.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 253.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 253.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 253.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 252.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 250.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 249.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 248.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 248.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 248.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 247.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 246.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 246.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 246.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 245.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 245.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 245.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 245.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 244.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 244.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 243.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 242.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 239.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 237.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 236.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 236.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 235.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 235.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 234.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 234.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 234.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 234.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 233.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 233.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 232.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 231.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 231.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 230.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 229.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 227.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 224.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 223.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 223.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 223.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 222.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 221.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 221.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 220.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 219.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 219.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 219.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 218.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 218.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 217.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 217.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 215.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 213.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 213.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 213.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 211.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 211.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 210.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 210.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 209.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 209.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 207.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 205.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 204.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 204.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 204.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 204.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 203.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 202.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 202.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 201.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 201.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 200.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 199.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 198.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 197.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 195.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 195.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 194.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 192.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 190.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 189.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 189.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 186.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 184.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 184.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 183.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 183.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 182.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 181.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 180.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 180.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 179.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 179.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 175.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 171.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 171.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 170.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 170.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 166.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 166.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 165.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 164.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 162.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 161.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 152.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 152.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 151.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 148.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 138.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 133.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 129.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 130.8
Samples: 4

Max nTPM: 148.1
Min nTPM: 93.1
Sample A Female 148.1
Sample B Female 139.1
Sample C Male 143.0
Sample D Male 93.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

317.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 317.3
Samples: 4

Max nTPM: 334.4
Min nTPM: 302.3
Sample A Male 310.5
Sample B Male 334.4
Sample C Female 321.9
Sample D Female 302.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.7
68845598 Antisense, RP_050224_02_B05, Mouse strain C57BL/6J (56 days, male) 3.8
71587919 Antisense, RP_050725_03_G05, Mouse strain C57BL/6J (56 days, male) 3.7

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