We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MAP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • MAP2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

86.027
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:181.8 nTPM
HPA Brain:749.2 nTPM
GTEx:181.8 nTPM
Pig:567.1 nTPM
Mouse:611.9 nTPM
Allen mouse:17.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA012828
Hypothalamus mean intensity 86.027
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 15.013
Periventricular hypothalamic nucleus 73.662
Supraoptic nucleus 58.768
Tuberal nucleus -
Ventral tuberomammillary nucleus 23.479
Lateral preoptic area 42.922
Medial preoptic area 38.900
Suprachiasmatic nucleus 74.928
Paraventricular hypothalamic nucleus 86.027
Anterior hypothalamic area, central 63.724
Ventral medial hypothalamic nucleus 34.247
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 34.137
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 38.660
Dorsal medial hypothalamic nucleus -
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

749.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 749.2
2226 Male, age 75, left hemisphere 1041.6
1961 Female, age 42, unknown 456.7
Dorsomedial nucleus
nTPM: 330.5
1989 Male, age 62, unknown 346.8
2041 Female, age 72, unknown 334.0
2017 Female, age 42, unknown 310.6
Lateral hypothalamic area
nTPM: 551.2
2228 Male, age 66, unknown 830.1
2271 Male, age 75, both hemispheres 564.2
1791 Male, age 80, right hemisphere 430.8
2412 Male, age 62, unknown 379.7
Mammillary body
nTPM: 275.3
1923 Female, age 72, unknown 363.4
2413 Male, age 66, unknown 321.2
1948 Female, age 72, unknown 249.3
1945 Male, age 80, right hemisphere 222.5
1834 Female, age 42, unknown 220.3
Paraventricular nucleus
nTPM: 380.6
2700 Male, age 62, unknown 380.6
Preoptic area
nTPM: 345.6
1907 Male, age 80, right hemisphere 481.0
1861 Female, age 42, unknown 299.5
2414 Female, age 72, unknown 256.4
Supraoptic nucleus
nTPM: 283.0
2835 Female, age 72, unknown 343.4
1894 Female, age 72, unknown 304.4
2043 Male, age 62, unknown 201.2
Ventromedial nucleus
nTPM: 536.4
1982 Female, age 72, unknown 578.6
1822 Female, age 42, unknown 494.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

181.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 181.8
Samples: 257

Max nTPM: 447.0
Min nTPM: 18.8
Std nTPM: 79.2
Median nTPM: 176.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 447.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 374.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 362.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 358.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 352.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 345.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 341.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 336.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 336.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 335.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 330.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 328.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 327.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 325.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 316.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 313.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 312.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 311.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 310.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 308.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 302.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 301.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 298.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 293.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 291.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 288.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 286.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 285.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 284.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 279.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 276.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 276.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 276.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 272.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 271.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 269.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 269.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 268.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 263.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 263.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 261.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 261.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 261.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 260.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 258.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 258.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 258.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 256.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 256.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 256.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 255.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 255.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 255.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 254.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 250.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 249.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 249.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 248.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 245.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 243.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 240.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 240.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 239.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 238.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 235.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 232.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 232.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 229.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 228.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 227.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 226.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 224.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 223.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 222.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 221.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 221.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 220.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 219.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 217.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 217.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 216.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 216.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 215.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 215.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 214.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 212.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 211.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 209.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 208.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 208.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 204.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 204.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 204.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 203.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 203.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 203.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 203.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 200.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 200.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 200.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 200.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 199.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 199.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 198.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 196.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 195.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 194.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 194.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 194.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 193.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 192.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 192.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 191.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 190.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 190.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 189.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 188.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 188.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 187.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 186.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 185.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 184.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 182.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 181.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 180.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 180.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 177.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 176.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 176.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 175.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 175.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 174.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 173.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 173.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 172.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 172.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 172.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 172.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 171.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 171.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 169.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 168.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 167.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 165.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 164.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 163.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 163.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 162.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 161.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 160.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 158.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 158.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 158.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 158.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 157.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 156.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 156.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 156.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 154.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 154.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 153.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 153.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 152.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 151.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 151.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 150.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 150.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 150.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 148.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 147.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 147.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 145.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 143.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 141.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 140.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 133.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 129.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 128.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 128.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 127.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 126.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 126.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 126.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 126.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 126.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 125.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 124.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 122.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 121.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 121.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 120.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 120.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 120.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 119.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 119.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 116.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 115.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 114.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 113.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 112.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 112.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 111.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 111.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 110.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 110.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 109.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 109.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 108.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 108.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 107.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 106.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 106.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 104.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 103.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 103.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 100.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 100.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 99.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 99.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 98.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 98.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 98.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 98.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 95.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 94.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 93.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 92.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 90.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 89.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 84.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 84.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 83.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 82.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 81.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 80.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 79.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 77.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 73.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 66.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 62.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 61.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 60.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 59.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 55.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 53.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 53.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 52.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 50.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 50.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 49.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 48.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 40.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 35.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 29.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 29.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 28.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 18.8
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

567.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 567.1
Samples: 4

Max nTPM: 792.4
Min nTPM: 463.2
Sample A Female 792.4
Sample B Female 510.0
Sample C Male 463.2
Sample D Male 502.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

611.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 611.9
Samples: 4

Max nTPM: 643.4
Min nTPM: 568.2
Sample A Male 568.2
Sample B Male 615.0
Sample C Female 643.4
Sample D Female 621.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.3
74272037 Antisense, RP_060202_01_A04, Mouse strain C57BL/6J (56 days, male) 19.0
69549641 Antisense, RP_050309_02_D02, Mouse strain C57BL/6J (56 days, male) 15.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo