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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • STRUCTURE

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  • SNAP25
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

26.770
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:391.0 nTPM
HPA Brain:643.7 nTPM
GTEx:391.0 nTPM
Pig:392.5 nTPM
Mouse:1056.7 nTPM
Allen mouse:23.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA001830
Hypothalamus mean intensity 26.770
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 26.770
Periventricular hypothalamic nucleus 1.223
Supraoptic nucleus 2.614
Tuberal nucleus 10.335
Ventral tuberomammillary nucleus -
Lateral preoptic area 5.299
Medial preoptic area 4.555
Suprachiasmatic nucleus 0.819
Paraventricular hypothalamic nucleus 9.807
Anterior hypothalamic area, central 2.215
Ventral medial hypothalamic nucleus 1.769
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 10.492
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 9.202
Dorsal medial hypothalamic nucleus 2.611
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

643.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 599.3
2226 Male, age 75, left hemisphere 1045.5
1961 Female, age 42, unknown 153.0
Dorsomedial nucleus
nTPM: 277.3
1989 Male, age 62, unknown 470.4
2017 Female, age 42, unknown 199.8
2041 Female, age 72, unknown 161.7
Lateral hypothalamic area
nTPM: 643.7
2228 Male, age 66, unknown 1419.4
2271 Male, age 75, both hemispheres 477.6
1791 Male, age 80, right hemisphere 411.9
2412 Male, age 62, unknown 265.9
Mammillary body
nTPM: 519.9
1923 Female, age 72, unknown 1030.2
2413 Male, age 66, unknown 511.7
1834 Female, age 42, unknown 395.2
1948 Female, age 72, unknown 380.5
1945 Male, age 80, right hemisphere 282.0
Paraventricular nucleus
nTPM: 213.2
2700 Male, age 62, unknown 213.2
Preoptic area
nTPM: 271.5
1907 Male, age 80, right hemisphere 340.2
1861 Female, age 42, unknown 250.2
2414 Female, age 72, unknown 224.1
Supraoptic nucleus
nTPM: 204.0
2835 Female, age 72, unknown 289.7
1894 Female, age 72, unknown 210.2
2043 Male, age 62, unknown 112.0
Ventromedial nucleus
nTPM: 157.4
1982 Female, age 72, unknown 172.7
1822 Female, age 42, unknown 142.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

391.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 391.0
Samples: 257

Max nTPM: 2743.1
Min nTPM: 17.6
Std nTPM: 292.3
Median nTPM: 330.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2743.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1867.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1649.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1547.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1377.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1307.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1284.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1109.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1075.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1032.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 766.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 763.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 763.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 745.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 740.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 733.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 725.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 715.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 703.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 685.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 682.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 659.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 638.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 636.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 622.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 619.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 611.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 610.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 608.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 603.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 599.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 579.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 578.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 575.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 575.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 573.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 573.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 562.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 561.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 561.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 557.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 557.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 557.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 540.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 536.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 523.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 523.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 522.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 522.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 522.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 519.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 517.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 507.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 498.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 497.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 494.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 494.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 492.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 491.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 487.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 485.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 484.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 482.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 481.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 477.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 464.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 463.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 462.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 462.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 460.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 460.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 454.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 453.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 453.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 449.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 447.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 442.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 438.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 436.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 431.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 431.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 428.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 427.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 425.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 422.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 421.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 417.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 414.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 413.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 412.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 409.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 407.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 400.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 400.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 398.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 397.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 397.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 395.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 394.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 390.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 390.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 388.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 388.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 388.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 382.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 382.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 382.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 380.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 378.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 378.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 376.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 376.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 371.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 371.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 367.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 364.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 362.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 362.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 361.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 360.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 358.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 350.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 349.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 349.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 347.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 346.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 342.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 333.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 330.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 329.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 326.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 325.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 322.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 322.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 320.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 320.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 320.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 320.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 318.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 318.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 316.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 315.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 314.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 313.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 311.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 311.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 310.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 309.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 307.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 306.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 306.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 302.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 300.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 293.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 291.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 289.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 289.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 288.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 284.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 284.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 283.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 283.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 283.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 282.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 278.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 276.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 275.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 274.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 273.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 271.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 269.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 269.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 268.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 266.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 265.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 265.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 264.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 262.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 262.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 261.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 251.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 250.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 245.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 243.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 243.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 242.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 242.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 241.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 240.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 237.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 236.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 236.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 232.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 227.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 226.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 226.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 225.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 220.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 220.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 219.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 219.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 215.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 215.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 214.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 212.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 211.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 208.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 207.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 206.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 198.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 197.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 196.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 195.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 193.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 190.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 188.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 187.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 183.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 179.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 178.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 178.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 177.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 168.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 166.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 157.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 156.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 151.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 148.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 147.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 144.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 144.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 143.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 136.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 132.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 126.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 123.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 123.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 121.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 120.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 120.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 115.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 112.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 85.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 78.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 77.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 73.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 73.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 70.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 69.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 67.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 59.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 49.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 47.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 38.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 37.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 33.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 17.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

392.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 392.5
Samples: 4

Max nTPM: 505.3
Min nTPM: 304.3
Sample A Female 505.3
Sample B Female 433.1
Sample C Male 327.3
Sample D Male 304.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1056.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1056.7
Samples: 4

Max nTPM: 1103.0
Min nTPM: 1001.2
Sample A Male 1089.3
Sample B Male 1033.3
Sample C Female 1103.0
Sample D Female 1001.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

23.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 23.8
70919418 Antisense, RP_050713_01_C08, Mouse strain C57BL/6J (56 days, male) 23.8

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