HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:774.7 nTPM
HPA Brain:196.4 nTPM
GTEx:774.7 nTPM
FANTOM5:39.6 Scaled Tags Per Million
Pig:5.4 nTPM
Mouse:565.1 nTPM
Allen mouse:17.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 196.4
Sample id Sample description nTPM
Hippocampus
nTPM: 196.4
1898 Male, age 80, left hemisphere 219.4
2529 Female, age 94, left hemisphere 215.1
2621 Female, age 67, right hemisphere 204.0
2148 Female, age 91, left hemisphere 191.6
1855 Male, age 76, left hemisphere 178.2
1911 Female, age 85, right hemisphere 170.1
Dentate gyrus
nTPM: 192.4
2530 Female, age 94, left hemisphere 245.4
2531 Female, age 67, both hemispheres 199.3
2010 Male, age 76, both hemispheres 186.3
1927 Female, age 91, both hemispheres 179.9
2246 Female, age 85, both hemispheres 175.7
2528 Male, age 74, both hemispheres 167.9
Entorhinal gyrus
nTPM: 185.7
2686 Male, age 75, right hemisphere 206.7
2764 Male, age 80, right hemisphere 189.0
1787 Male, age 76, left hemisphere 188.8
2117 Female, age 91, right hemisphere 187.1
1938 Female, age 85, left hemisphere 175.9
2613 Female, age 94, left hemisphere 166.9
Hippocampus, CA1
nTPM: 184.6
2749 Male, age 80, left hemisphere 199.1
2082 Female, age 91, right hemisphere 195.5
1873 Female, age 85, both hemispheres 187.7
2045 Male, age 76, both hemispheres 171.1
2527 Male, age 74, both hemispheres 169.6
Hippocampus, CA2
nTPM: 186.4
1963 Male, age 80, left hemisphere 220.4
1892 Male, age 76, both hemispheres 202.3
2437 Female, age 94, left hemisphere 190.1
2113 Female, age 91, right hemisphere 178.4
1940 Female, age 85, left hemisphere 169.2
2249 Male, age 74, both hemispheres 158.0
Hippocampus, CA3
nTPM: 182.9
2861 Female, age 67, both hemispheres 219.5
1867 Male, age 76, both hemispheres 204.5
2137 Male, age 80, left hemisphere 177.2
2620 Female, age 94, left hemisphere 169.2
1891 Female, age 85, both hemispheres 168.9
2436 Male, age 74, both hemispheres 157.9
Parahippocampal cortex
nTPM: 172.6
2018 Male, age 76, both hemispheres 194.4
1850 Male, age 80, both hemispheres 189.1
1933 Female, age 85, both hemispheres 181.7
2245 Female, age 91, both hemispheres 180.0
1990 Female, age 91, right hemisphere 175.0
2250 Female, age 67, right hemisphere 173.8
2532 Female, age 72, left hemisphere 167.2
2622 Female, age 67, right hemisphere 164.5
2692 Male, age 74, both hemispheres 159.6
2693 Female, age 94, both hemispheres 140.6
Perirhinal gyrus
nTPM: 183.9
1847 Female, age 91, left hemisphere 205.7
1794 Male, age 80, right hemisphere 191.7
1841 Female, age 85, right hemisphere 187.0
2521 Female, age 94, right hemisphere 170.4
2848 Male, age 76, right hemisphere 164.7
Subiculum
nTPM: 177.7
1977 Female, age 85, both hemispheres 193.2
2042 Male, age 76, both hemispheres 180.1
2729 Female, age 91, right hemisphere 179.5
1901 Male, age 80, both hemispheres 172.9
2438 Female, age 94, left hemisphere 172.1
2619 Male, age 74, both hemispheres 168.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 774.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 774.7
Samples: 255

Max nTPM: 1991.1
Min nTPM: 491.5
Std nTPM: 191.2
Median nTPM: 730.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1991.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1473.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1436.6
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1358.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1317.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1297.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1288.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1189.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1179.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1143.3
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1133.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.6
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.4
Pig sample Sample description nTPM
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 7.3
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 7.3
Sample C Male 4.9
Sample D Male 4.0
Dorsal hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 8.3
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 8.3
Sample C Male 4.6
Sample D Male 3.4
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 8.7
Min nTPM: 2.7
Sample A Female 2.7
Sample B Female 8.7
Sample C Male 5.2
Sample D Male 5.2
Ventral hippocampus
nTPM: 4.6
Samples: 4

Max nTPM: 7.0
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 7.0
Sample C Male 5.1
Sample D Male 3.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 565.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 504.1
Samples: 4

Max nTPM: 569.5
Min nTPM: 462.6
Sample A Male 488.3
Sample B Male 462.6
Sample C Female 569.5
Sample D Female 496.1
Hippocampal formation
nTPM: 565.1
Samples: 4

Max nTPM: 637.8
Min nTPM: 508.8
Sample A Male 637.8
Sample B Male 508.8
Sample C Female 557.3
Sample D Female 556.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
69818332 Antisense, RP_050510_04_H05, Mouse strain C57BL/6J (56 days, male) 18.2
81600152 Antisense, RP_080320_03_A06, Mouse strain C57BL/6J (56 days, male) 16.9

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