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ARHGAP1
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  • TISSUE

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  • ARHGAP1
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Mouse brain, Intensity
Hippocampal formationi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

99.866
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:63.4 nTPM
GTEx:48.9 nTPM
FANTOM5:66.6 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA004689Antibody HPA008285
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA004689
Hippocampal formation mean intensity 99.866
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Polymorph layer of the dentate gyrus 78.602
Molecular layer of the dentate gyrus 45.808
Granular dentate gyrus 99.866
CA1 - oriens layer 54.505
CA1 - pyramidal layer 94.466
CA1 - radiatum layer 52.619
CA2 - oriens layer 21.317
CA2 - pyramidal layer 35.616
CA2 - radiatum layer 28.645
CA3 - oriens layer 30.396
CA3 - pyramidal layer 41.165
CA3 - radiatum layer 27.965
Stratum lucidum 32.973
Lacunosum moleculare 37.849
Subiculum 30.576

HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.4
Sample id Sample description nTPM
Hippocampus
nTPM: 63.4
1855 Male, age 76, left hemisphere 67.9
2621 Female, age 67, right hemisphere 65.8
1911 Female, age 85, right hemisphere 64.8
2148 Female, age 91, left hemisphere 64.6
2529 Female, age 94, left hemisphere 60.3
1898 Male, age 80, left hemisphere 57.2

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.9
Samples: 255

Max nTPM: 154.9
Min nTPM: 17.3
Std nTPM: 20.8
Median nTPM: 44.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 154.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 148.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 146.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 141.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 114.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 108.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 102.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 100.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 99.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 94.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 89.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 88.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 84.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 83.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 83.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 81.7
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 80.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 79.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 79.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 78.2
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 78.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 77.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 75.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 75.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 74.0
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 73.7
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 73.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 73.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 71.1
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 70.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 70.0
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 69.2
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 69.2
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 68.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 68.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 68.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 66.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 65.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 64.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 64.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 64.2
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 64.0
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 63.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 63.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 60.5
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 60.3
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 60.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 60.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 60.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 59.7
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 59.7
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 59.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 59.3
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 58.6
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 57.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 57.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 57.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 57.1
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 57.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 57.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 56.6
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 56.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 55.6
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 55.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 55.2
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 54.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 54.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 54.2
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 53.7
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 53.5
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 53.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 53.3
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 53.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 52.7
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 52.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 52.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 52.0
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 51.5
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 51.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 51.1
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 51.0
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 50.9
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 50.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 50.4
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 50.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 50.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 50.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 50.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 50.1
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 50.0
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 49.7
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 49.5
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 49.3
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 49.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 49.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 49.1
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 48.9
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 48.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 48.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 48.5
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 48.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 47.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 47.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 47.4
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 47.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 47.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 47.1
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 47.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 46.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 46.7
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 46.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 46.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 45.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 45.8
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 45.8
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 45.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 45.6
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 45.5
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 45.4
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 44.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 44.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 44.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 44.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 44.6
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 44.5
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 44.5
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 44.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 44.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 44.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 44.1
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 44.0
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 43.7
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 43.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 43.6
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 43.4
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 43.1
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 43.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 42.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 42.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 42.2
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 42.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 42.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 42.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 42.0
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 42.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 41.9
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 41.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 41.7
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 41.6
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 41.6
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 41.4
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 41.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 41.1
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 41.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 40.9
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 40.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 40.7
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 40.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 40.7
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 40.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 40.2
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 40.2
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 40.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 40.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 39.3
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 39.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 39.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 38.9
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 38.6
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 38.6
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 38.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 38.6
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 38.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 38.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 38.1
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 38.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 37.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 37.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 37.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 37.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 37.4
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 37.3
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 37.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 37.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 37.2
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 37.1
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 36.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 36.6
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 36.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 36.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 36.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 35.9
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 35.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 35.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 35.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 35.1
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 35.0
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 35.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 34.5
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 34.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 34.2
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 34.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 33.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 33.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 33.3
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 33.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 33.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 32.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 32.8
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 32.8
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 32.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 32.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 32.4
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 31.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 31.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 31.5
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 31.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 31.1
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 30.4
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 30.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 30.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 30.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 29.5
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 29.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 29.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 29.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 28.3
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 28.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 28.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 27.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 27.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 27.5
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 27.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 27.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 26.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 26.3
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 26.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 25.6
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 25.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 25.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.6
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 24.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 22.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 22.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 21.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 20.9
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 20.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 17.3
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HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.6
FF:10153-102I9 76 years, female 78.2
FF:10169-103B7 60 years, female 55.0

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