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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:41.1 nTPM
GTEx:41.1 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.1
GTEx sample id Sample description nTPM
Retina
Average nTPM: 41.1
Samples: 105

Max nTPM: 86.7
Min nTPM: 17.8
Std nTPM: 13.5
Median nTPM:
4_1 88 years, female 86.7
251_1 78 years, male 78.9
218_1 71 years, female 65.7
351_1 91 years, male 64.5
350_1 84 years, female 63.2
292_1 71 years, male 62.4
384_1 83 years, male 60.9
321_1 62 years, female 60.8
379_1 60 years, male 60.8
506_1 65 years, male 60.4
163_1 78 years, male 60.0
452_1 88 years, female 59.8
319_1 81 years, male 58.1
295_1 61 years, female 56.2
41_1 94 years, female 54.8
355_1 70 years, female 54.8
177_1 74 years, male 54.4
354_1 81 years, female 54.4
394_1 75 years, female 54.1
377_1 82 years, female 53.2
353_1 82 years, female 52.7
320_1 89 years, female 52.2
99_1 64 years, male 52.1
315_1 62 years, female 52.1
291_1 76 years, male 51.1
503_1 68 years, male 50.9
35_1 74 years, female 50.7
189_1 76 years, male 50.0
349_1 83 years, male 49.6
347_1 72 years, male 49.3
115_1 83 years, male 48.8
243_1 75 years, male 48.8
293_1 68 years, female 48.4
246_1 77 years, male 47.8
42_1 85 years, male 47.6
17_1 71 years, male 47.2
386_1 76 years, male 47.1
2_1 77 years, female 46.9
237_1 82 years, male 46.9
375_1 74 years, female 46.6
318_1 68 years, male 46.5
173_1 67 years, male 45.8
480_1 63 years, male 45.6
447_1 81 years, male 45.5
229_1 69 years, female 45.0
172_1 72 years, female 44.8
376_1 75 years, female 44.6
356_1 87 years, female 42.8
335_1 73 years, female 42.4
517_1 88 years, male 41.6
352_1 62 years, male 39.9
9_1 66 years, female 38.9
406_1 79 years, male 38.2
120_1 70 years, female 37.2
142_1 61 years, female 37.2
425_1 59 years, female 37.0
396_1 62 years, male 36.9
109_1 81 years, female 36.6
389_1 86 years, female 36.4
126_1 63 years, male 36.3
348_1 84 years, male 36.0
526_1 61 years, male 36.0
322_1 76 years, male 35.0
145_1 84 years, male 34.5
316_1 62 years, male 34.2
404_1 82 years, female 34.2
313_1 79 years, female 33.7
311_1 78 years, male 33.6
153_1 70 years, female 33.3
317_1 60 years, male 33.1
18_1 88 years, male 32.8
254_1 77 years, female 32.8
324_1 76 years, male 32.4
117_1 61 years, male 32.1
139_1 64 years, female 31.7
266_1 85 years, male 31.4
162_1 79 years, female 31.2
405_1 91 years, male 31.2
518_1 75 years, female 30.7
81_1 67 years, male 30.4
264_1 73 years, female 30.3
6_1 73 years, female 29.7
468_1 89 years, male 29.6
288_1 66 years, female 29.3
415_1 77 years, female 28.7
32_1 67 years, male 28.6
501_1 88 years, male 28.5
217_1 76 years, male 27.6
265_1 87 years, male 27.5
137_1 83 years, male 27.0
43_1 64 years, female 26.7
466_1 57 years, female 26.5
307_1 66 years, female 25.5
89_1 63 years, male 24.9
308_1 70 years, female 24.6
491_1 89 years, female 24.3
499_1 55 years, female 23.6
314_1 67 years, male 22.6
495_1 57 years, female 22.5
413_1 59 years, female 22.2
149_1 88 years, male 21.7
119_1 70 years, female 21.6
286_1 68 years, female 19.3
414_1 84 years, female 18.1
490_1 67 years, female 17.8
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