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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:68.1 nTPM
HPA Brain:58.1 nTPM
GTEx:68.1 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 53.3
2565 Male, age 75, midline 63.6
2194 Female, age 79, both hemispheres 62.4
1981 Female, age 72, midline 52.1
2048 Male, age 55, midline 48.2
2816 Male, age 47, midline 40.3
Cervical spinal cord, dorsal horn
nTPM: 57.1
2069 Male, age 47, both hemispheres 65.5
2297 Male, age 75, both hemispheres 63.9
2721 Male, age 90, both hemispheres 60.2
2296 Male, age 66, both hemispheres 58.8
2173 Female, age 72, unknown 51.3
1877 Male, age 55, unknown 42.9
Cervical spinal cord, ventral horn
nTPM: 58.1
2480 Male, age 75, both hemispheres 72.6
2820 Female, age 79, both hemispheres 63.5
2068 Male, age 55, unknown 61.7
2809 Male, age 90, both hemispheres 59.2
2295 Male, age 66, both hemispheres 51.5
2098 Female, age 72, unknown 39.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 68.1
Samples: 159

Max nTPM: 126.9
Min nTPM: 27.6
Std nTPM: 19.4
Median nTPM: 66.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 126.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 124.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 121.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 119.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 113.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 109.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 108.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 108.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 107.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 104.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 101.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 101.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 101.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 99.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 98.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 97.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 97.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 94.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 93.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 90.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 90.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 86.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 86.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 85.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 83.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 83.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 82.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 82.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 82.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 82.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 82.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 81.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 81.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 80.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 80.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 80.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 80.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 79.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 78.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 78.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 77.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 77.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 76.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 76.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 76.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 76.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 76.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 76.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 75.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 75.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 75.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 75.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 74.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 74.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 74.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 74.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 74.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 73.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 72.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 71.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 71.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 71.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 71.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 70.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 70.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 70.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 70.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 69.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 69.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 69.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 68.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 68.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 68.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 67.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 67.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 67.5
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 67.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 67.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 66.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 66.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 66.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 66.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 64.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 63.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 62.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 62.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 61.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 61.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 61.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 61.4
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 61.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 61.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 60.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 60.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 60.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 60.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 60.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 60.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 59.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 59.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 59.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 58.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 58.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 58.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 58.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 58.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 58.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 58.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 57.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 57.6
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 57.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 56.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 56.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 55.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 55.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 55.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 55.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 55.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 55.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 54.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 54.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 54.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 54.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 53.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 53.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 53.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 52.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 52.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 52.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 51.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 51.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 51.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 50.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 50.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 50.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 50.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 50.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 48.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 47.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 47.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 47.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 46.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 45.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 45.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 45.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 44.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 43.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 42.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 41.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 40.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 40.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 39.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 39.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 39.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 38.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 37.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 33.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 32.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 27.6
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