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ARHGAP33
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:24.1 nTPM
HPA:24.1 nTPM
GTEx:43.7 nTPM
FANTOM5:52.5 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:122.5 nTPM
Allen mouse:13.8 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA030117Antibody HPA030118
Glial cells Not detectedLow
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 24.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 17.3
1781 Male, age 74, unknown 21.8
1857 Female, age 85, left hemisphere 21.1
2846 Female, age 79, unknown 20.7
1854 Male, age 80, left hemisphere 18.9
2306 Female, age 91, right hemisphere 17.0
2713 Male, age 75, left hemisphere 16.6
2301 Female, age 72, unknown 14.5
2302 Male, age 61, right hemisphere 13.4
2481 Female, age 94, left hemisphere 11.4
Claustrum
nTPM: 24.1
2568 Male, age 61, both hemispheres 34.9
2645 Female, age 72, unknown 31.9
2198 Male, age 80, both hemispheres 25.3
2491 Male, age 75, both hemispheres 24.5
1956 Male, age 74, unknown 23.9
2196 Female, age 79, unknown 23.0
2392 Female, age 94, both hemispheres 18.7
2307 Female, age 91, both hemispheres 18.2
2299 Female, age 85, both hemispheres 16.4
Globus pallidus, externus
nTPM: 14.0
2646 Male, age 61, right hemisphere 21.5
2567 Female, age 72, unknown 19.0
2644 Female, age 94, right hemisphere 14.3
2011 Female, age 91, left hemisphere 13.8
2114 Female, age 85, right hemisphere 12.3
2395 Male, age 75, both hemispheres 12.2
2772 Female, age 79, unknown 9.7
1996 Male, age 80, right hemisphere 9.1
Globus pallidus, internus
nTPM: 14.8
1997 Male, age 61, left hemisphere 21.4
2111 Female, age 85, right hemisphere 19.5
2566 Female, age 72, unknown 18.6
2778 Female, age 91, both hemispheres 14.4
1818 Male, age 74, unknown 12.4
2037 Male, age 80, right hemisphere 11.1
2714 Male, age 75, right hemisphere 10.7
2483 Female, age 94, right hemisphere 10.1
Nucleus accumbens
nTPM: 19.1
1783 Male, age 74, unknown 24.2
2698 Female, age 72, unknown 22.6
2824 Male, age 61, right hemisphere 21.5
1806 Female, age 85, left hemisphere 20.3
1856 Female, age 91, right hemisphere 18.5
2732 Male, age 80, right hemisphere 16.5
2305 Male, age 75, left hemisphere 16.2
2391 Female, age 94, left hemisphere 13.2
Nucleus basalis of Meynert
nTPM: 18.5
2569 Male, age 61, both hemispheres 25.0
2200 Female, age 91, left hemisphere 22.6
2484 Female, age 94, left hemisphere 18.9
2300 Female, age 85, both hemispheres 18.4
2821 Male, age 75, both hemispheres 16.9
2393 Male, age 80, right hemisphere 15.2
2842 Male, age 74, unknown 12.7
Nucleus of the diagonal band
nTPM: 23.4
2029 Male, age 61, right hemisphere 29.3
2195 Female, age 85, both hemispheres 27.7
2775 Male, age 80, right hemisphere 22.9
1812 Female, age 91, both hemispheres 19.4
1979 Male, age 74, unknown 17.8
Olfactory tubercle
nTPM: 23.0
2487 Female, age 94, left hemisphere 25.2
2856 Male, age 75, right hemisphere 25.1
1998 Female, age 91, both hemispheres 21.5
1846 Male, age 80, right hemisphere 20.1
Putamen
nTPM: 18.0
1838 Male, age 80, right hemisphere 22.3
2489 Female, age 72, unknown 21.0
1829 Male, age 74, unknown 20.5
2647 Male, age 75, left hemisphere 19.7
2466 Female, age 79, unknown 17.5
1937 Female, age 91, right hemisphere 17.4
2488 Female, age 85, left hemisphere 15.7
2490 Male, age 61, left hemisphere 15.0
2482 Female, age 94, left hemisphere 13.0
Septal nuclei
nTPM: 21.0
2059 Female, age 85, both hemispheres 25.9
2629 Female, age 94, right hemisphere 25.2
1960 Male, age 74, unknown 22.6
2394 Male, age 61, left hemisphere 21.0
2031 Female, age 72, unknown 19.3
2009 Female, age 91, both hemispheres 17.6
2199 Male, age 80, right hemisphere 15.8

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 43.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 37.3
Samples: 246

Max nTPM: 67.2
Min nTPM: 9.7
Std nTPM: 11.5
Median nTPM: 37.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 67.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 63.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 62.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 62.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 61.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 60.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 60.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 59.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 59.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 43.7
Samples: 246

Max nTPM: 87.2
Min nTPM: 10.0
Std nTPM: 13.6
Median nTPM: 44.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 87.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 79.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 78.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 75.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 75.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 74.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 72.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 69.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 68.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 67.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.9
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Brain - Putamen (basal ganglia)
Average nTPM: 34.7
Samples: 205

Max nTPM: 73.5
Min nTPM: 8.1
Std nTPM: 11.5
Median nTPM: 35.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 73.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 64.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 64.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 57.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 56.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 55.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 54.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 54.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 53.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 53.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 41.5
FF:10164-103B2 76 years, female 41.5
Nucleus accumbens
Scaled Tags Per Million: 52.5
FF:10037-101F1 23-56 years, mixed 52.5
Putamen
Scaled Tags Per Million: 52.5
FF:10176-103C5 60 years, female 52.5

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Caudate
nTPM: 26.1
Samples: 4

Max nTPM: 30.3
Min nTPM: 21.7
Sample A Female 21.7
Sample B Female 30.3
Sample C Male 28.3
Sample D Male 24.2
Putamen
nTPM: 20.9
Samples: 4

Max nTPM: 28.4
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 22.1
Sample C Male 19.5
Sample D Male 28.4
Septum
nTPM: 16.5
Samples: 4

Max nTPM: 21.1
Min nTPM: 10.8
Sample A Female 19.0
Sample B Female 21.1
Sample C Male 10.8
Sample D Male 15.0
Ventral pallidum
nTPM: 21.1
Samples: 4

Max nTPM: 23.6
Min nTPM: 17.8
Sample A Female 23.6
Sample B Female 19.6
Sample C Male 17.8
Sample D Male 23.2

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 122.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 122.5
Samples: 4

Max nTPM: 144.0
Min nTPM: 98.4
Sample A Male 116.1
Sample B Male 144.0
Sample C Female 98.4
Sample D Female 131.6
Septum
nTPM: 45.9
Samples: 4

Max nTPM: 50.5
Min nTPM: 42.6
Sample A Male 50.5
Sample B Male 46.1
Sample C Female 42.6
Sample D Female 44.3
Ventral forebrain
nTPM: 90.5
Samples: 4

Max nTPM: 104.4
Min nTPM: 81.3
Sample A Male 90.3
Sample B Male 81.3
Sample C Female 104.4
Sample D Female 86.1

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 13.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.8
74583174 Antisense, RP_051214_02_F12, Mouse strain C57BL/6J (56 days, male) 15.3
68843937 Antisense, RP_050217_02_E11, Mouse strain C57BL/6J (56 days, male) 12.2
Pallidum
Expression energy: 6.2
74583174 Antisense, RP_051214_02_F12, Mouse strain C57BL/6J (56 days, male) 6.8
68843937 Antisense, RP_050217_02_E11, Mouse strain C57BL/6J (56 days, male) 5.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.