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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:20.5 nTPM
HPA:20.5 nTPM
GTEx:17.6 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Pig:5.8 nTPM
Mouse:4.4 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA020735Antibody HPA029914
Glial cells Not detectedNot detected
Neuronal cells MediumLow


BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 20.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 17.3
2481 Female, age 94, left hemisphere 17.9
2846 Female, age 79, unknown 17.7
1854 Male, age 80, left hemisphere 17.6
1857 Female, age 85, left hemisphere 17.6
2290 Female, age 72, unknown 17.3
1781 Male, age 74, unknown 17.1
2288 Male, age 75, left hemisphere 17.0
2289 Male, age 61, right hemisphere 16.5
Claustrum
nTPM: 17.4
2198 Male, age 80, both hemispheres 18.2
2392 Female, age 94, both hemispheres 18.1
1956 Male, age 74, unknown 17.8
2491 Male, age 75, both hemispheres 17.7
2645 Female, age 72, unknown 17.3
2284 Female, age 91, both hemispheres 17.1
2292 Female, age 85, both hemispheres 17.0
2196 Female, age 79, unknown 16.9
2568 Male, age 61, both hemispheres 16.8
Globus pallidus, externus
nTPM: 16.5
2395 Male, age 75, both hemispheres 18.0
2772 Female, age 79, unknown 17.2
1996 Male, age 80, right hemisphere 16.8
2646 Male, age 61, right hemisphere 15.6
2567 Female, age 72, unknown 15.0
Globus pallidus, internus
nTPM: 16.9
2483 Female, age 94, right hemisphere 17.8
2778 Female, age 91, both hemispheres 17.6
2287 Male, age 75, right hemisphere 16.9
2037 Male, age 80, right hemisphere 16.8
1818 Male, age 74, unknown 16.7
2566 Female, age 72, unknown 16.2
2111 Female, age 85, right hemisphere 16.1
Nucleus accumbens
nTPM: 16.9
2286 Male, age 75, left hemisphere 18.0
1806 Female, age 85, left hemisphere 17.1
1856 Female, age 91, right hemisphere 16.9
2824 Male, age 61, right hemisphere 16.9
2698 Female, age 72, unknown 16.7
1783 Male, age 74, unknown 16.6
2732 Male, age 80, right hemisphere 16.5
2391 Female, age 94, left hemisphere 16.4
Nucleus basalis of Meynert
nTPM: 17.1
2393 Male, age 80, right hemisphere 17.9
2821 Male, age 75, both hemispheres 17.5
2484 Female, age 94, left hemisphere 17.4
2569 Male, age 61, both hemispheres 15.5
Nucleus of the diagonal band
nTPM: 20.5
2775 Male, age 80, right hemisphere 21.9
1812 Female, age 91, both hemispheres 21.2
2195 Female, age 85, both hemispheres 20.8
2029 Male, age 61, right hemisphere 20.7
1979 Male, age 74, unknown 18.1
Olfactory tubercle
nTPM: 19.2
1846 Male, age 80, right hemisphere 20.7
1998 Female, age 91, both hemispheres 20.2
2487 Female, age 94, left hemisphere 18.7
2856 Male, age 75, right hemisphere 17.1
Putamen
nTPM: 17.1
2482 Female, age 94, left hemisphere 18.5
2466 Female, age 79, unknown 17.4
1829 Male, age 74, unknown 17.1
2647 Male, age 75, left hemisphere 17.0
1937 Female, age 91, right hemisphere 16.9
1838 Male, age 80, right hemisphere 16.7
2489 Female, age 72, unknown 16.0
Septal nuclei
nTPM: 19.5
2031 Female, age 72, unknown 23.3
1960 Male, age 74, unknown 21.6
2009 Female, age 91, both hemispheres 20.7
2059 Female, age 85, both hemispheres 18.3
2394 Male, age 61, left hemisphere 18.3
2199 Male, age 80, right hemisphere 17.7
2629 Female, age 94, right hemisphere 16.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 17.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 17.4
Samples: 246

Max nTPM: 36.3
Min nTPM: 6.3
Std nTPM: 4.8
Median nTPM: 17.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 36.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 33.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 31.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 28.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 28.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 28.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 28.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 26.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 26.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 26.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 26.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 25.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 24.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 24.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 24.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 24.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 24.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 24.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 23.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 23.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 23.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 23.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 23.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 23.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 23.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 23.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 23.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 22.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 22.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 22.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 21.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 21.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 21.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 21.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 21.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 21.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 21.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 21.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 21.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 21.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 20.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 20.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 20.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 20.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 20.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 20.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 20.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 20.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 20.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 20.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 20.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 20.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 20.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 20.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 20.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 20.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 20.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 20.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 20.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 20.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 20.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 19.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 19.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 19.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 19.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 19.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 19.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 19.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 19.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 19.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 19.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 19.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 19.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 19.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 19.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 19.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 19.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 19.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 19.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 18.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 18.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 18.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 18.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 18.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 18.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 18.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 18.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 18.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 18.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 18.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 18.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 18.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 18.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 18.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 18.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 18.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 18.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 18.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 17.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 17.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 17.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 17.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 17.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 17.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 17.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 17.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 17.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 17.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 17.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 17.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 17.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 17.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 17.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 17.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 17.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 17.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 17.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 17.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 17.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 17.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 16.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 16.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 16.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 16.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 16.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 16.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 16.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 16.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 16.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 16.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 16.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 16.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 16.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 16.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 16.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 16.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 16.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 16.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 16.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 16.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 16.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 16.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 16.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 16.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 16.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 16.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 16.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 15.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 15.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 15.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 15.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 15.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 15.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 15.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 15.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 15.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 15.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 15.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 15.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 15.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 15.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 15.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 15.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 15.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 14.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 14.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 14.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 14.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 14.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 14.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 14.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 14.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 14.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 14.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 14.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 14.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 14.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 14.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 14.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 14.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 14.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 14.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 13.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 13.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 13.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 13.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 13.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 13.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 13.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 13.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 13.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 13.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 13.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 12.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 12.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 12.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 12.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 12.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 12.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 12.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 12.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 12.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 12.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 12.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 12.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 12.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 12.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 12.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 11.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 11.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 11.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 11.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 11.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 11.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 11.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 10.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 10.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 10.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 10.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 10.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 10.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 10.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 10.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 10.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 10.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 9.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 9.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 9.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 9.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 8.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 8.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 8.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 7.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 6.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 17.1
Samples: 246

Max nTPM: 26.8
Min nTPM: 3.2
Std nTPM: 3.9
Median nTPM: 17.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 26.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 26.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 26.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 25.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 25.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 25.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 25.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 25.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 24.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 24.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 24.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 23.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 23.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 23.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 23.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 23.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 23.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 23.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 22.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 22.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 22.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 22.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 22.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 22.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 22.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 22.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 22.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 22.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 22.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 22.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 21.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 21.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 21.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 21.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 21.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 21.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 21.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 21.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 21.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 21.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 21.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 21.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 21.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 21.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 20.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 20.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 20.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 20.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 20.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 20.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 20.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 20.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 20.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 20.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 20.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 20.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 20.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 20.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 20.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 20.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 20.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 20.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 19.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 19.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 19.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 19.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 19.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 19.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 19.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 19.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 19.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 19.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 19.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 19.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 19.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 19.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 19.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 19.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 18.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 18.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 18.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 18.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 18.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 18.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 18.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 18.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 18.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 18.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 18.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 18.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 18.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 18.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 18.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 18.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 18.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 18.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 18.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 17.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 17.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 17.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 17.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 17.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 17.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 17.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 17.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 17.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 17.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 17.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 17.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 17.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 17.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 17.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 17.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 17.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 17.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 17.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 17.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 17.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 17.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 17.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 17.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 17.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 17.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 17.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 17.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 17.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 17.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 17.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 16.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 16.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 16.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 16.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 16.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 16.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 16.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 16.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 16.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 16.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 16.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 16.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 16.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 16.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 16.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 16.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 16.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 16.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 16.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 16.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 16.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 16.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 16.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 15.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 15.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 15.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 15.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 15.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 15.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 15.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 15.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 15.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 15.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 15.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 15.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 15.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 15.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 15.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 15.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 14.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 14.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 14.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 14.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 14.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 14.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 14.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 14.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 14.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 14.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 14.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 14.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 14.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 14.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 14.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 14.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 14.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 14.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 14.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 13.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 13.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 13.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 13.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 13.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 13.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 13.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 13.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 13.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 13.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 13.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 13.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 13.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 13.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 13.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 13.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 13.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 13.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 13.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 12.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 12.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 12.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 12.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 12.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 12.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 12.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 12.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 12.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 12.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 12.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 11.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 11.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 11.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 11.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 11.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 11.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 11.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 11.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 11.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 11.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 11.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 11.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 11.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 11.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 10.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 10.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 10.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 10.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 10.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 10.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 10.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 9.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 9.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 9.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 3.2
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Brain - Putamen (basal ganglia)
Average nTPM: 17.6
Samples: 205

Max nTPM: 33.8
Min nTPM: 4.1
Std nTPM: 4.6
Median nTPM: 17.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 33.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 30.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 30.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 28.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 27.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 27.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 25.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 25.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 25.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 25.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 25.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 24.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 24.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 24.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 24.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 24.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 24.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 24.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 23.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 23.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 23.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 23.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 23.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 23.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 23.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 23.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 23.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 22.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 22.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 22.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 22.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 22.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 22.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 21.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 21.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 21.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 21.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 21.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 21.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 21.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 21.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 21.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 21.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 21.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 20.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 20.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 20.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 20.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 20.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 20.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 20.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 20.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 20.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 20.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 20.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 20.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 20.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 20.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 20.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 19.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 19.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 19.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 19.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 19.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 19.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 19.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 19.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 19.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 19.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 19.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 19.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 19.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 18.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 18.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 18.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 18.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 18.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 18.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 18.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 18.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 18.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 18.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 18.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 18.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 18.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 18.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 18.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 18.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 18.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 17.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 17.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 17.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 17.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 17.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 17.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 17.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 17.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 17.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 17.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 17.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 17.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 17.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 17.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 17.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 17.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 17.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 16.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 16.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 16.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 16.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 16.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 16.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 16.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 16.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 16.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 16.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 16.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 16.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 16.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 16.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 16.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 16.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 16.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 15.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 15.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 15.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 15.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 15.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 15.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 15.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 15.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 15.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 15.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 15.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 15.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 15.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 14.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 14.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 14.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 14.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 14.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 14.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 14.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 14.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 14.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 14.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 14.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 13.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 13.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 13.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 13.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 13.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 13.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 13.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 13.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 13.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 13.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 13.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 13.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 13.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 12.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 12.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 12.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 12.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 12.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 12.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 12.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 12.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 12.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 12.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 12.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 12.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 12.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 11.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 11.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 11.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 11.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 11.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 11.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 11.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 10.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 9.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 9.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 8.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 21.7
FF:10164-103B2 76 years, female 21.7
Globus pallidus
Scaled Tags Per Million: 18.2
FF:10161-103A8 76 years, female 19.1
FF:10175-103C4 60 years, female 17.3
Nucleus accumbens
Scaled Tags Per Million: 31.3
FF:10037-101F1 23-56 years, mixed 31.3
Putamen
Scaled Tags Per Million: 20.8
FF:10176-103C5 60 years, female 20.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 5.8
Pig sample Sample description nTPM
Caudate
nTPM: 5.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.7
Sample A Female 6.0
Sample B Female 4.7
Sample C Male 6.1
Sample D Male 5.1
Putamen
nTPM: 5.1
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.7
Sample A Female 4.7
Sample B Female 4.7
Sample C Male 6.1
Sample D Male 5.0
Septum
nTPM: 5.8
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.0
Sample A Female 5.6
Sample B Female 5.4
Sample C Male 5.0
Sample D Male 7.2
Ventral pallidum
nTPM: 5.2
Samples: 4

Max nTPM: 5.5
Min nTPM: 4.5
Sample A Female 5.5
Sample B Female 5.5
Sample C Male 4.5
Sample D Male 5.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 4.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.2
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.6
Sample A Male 3.6
Sample B Male 3.6
Sample C Female 2.8
Sample D Female 2.6
Septum
nTPM: 4.4
Samples: 4

Max nTPM: 4.7
Min nTPM: 4.2
Sample A Male 4.4
Sample B Male 4.7
Sample C Female 4.3
Sample D Female 4.2
Ventral forebrain
nTPM: 3.7
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.0
Sample A Male 3.6
Sample B Male 3.0
Sample C Female 3.7
Sample D Female 4.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
69447894 Antisense, RP_050419_02_C08, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
69447894 Antisense, RP_050419_02_C08, Mouse strain C57BL/6J (56 days, male) 0.0

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