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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:28.4 nTPM
FANTOM5:106.8 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 10.1
1981 Female, age 72, midline 11.7
2194 Female, age 79, both hemispheres 10.8
2048 Male, age 55, midline 9.9
2816 Male, age 47, midline 9.5
2565 Male, age 75, midline 8.8
Cervical spinal cord, dorsal horn
nTPM: 11.7
2296 Male, age 66, both hemispheres 14.9
2069 Male, age 47, both hemispheres 14.2
2173 Female, age 72, unknown 13.8
1877 Male, age 55, unknown 10.2
2721 Male, age 90, both hemispheres 9.8
2297 Male, age 75, both hemispheres 7.6
Cervical spinal cord, ventral horn
nTPM: 10.6
2098 Female, age 72, unknown 18.6
2809 Male, age 90, both hemispheres 11.2
2820 Female, age 79, both hemispheres 9.9
2295 Male, age 66, both hemispheres 9.1
2068 Male, age 55, unknown 8.5
2480 Male, age 75, both hemispheres 6.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 28.4
Samples: 159

Max nTPM: 50.4
Min nTPM: 15.0
Std nTPM: 6.1
Median nTPM: 27.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 50.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 50.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 50.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 49.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 48.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 47.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 42.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 41.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 38.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 37.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 37.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 36.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 35.7
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 35.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 35.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 35.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 34.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 34.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 34.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 34.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 34.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 34.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 34.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 33.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 33.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 33.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 32.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 32.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 32.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 32.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 32.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 32.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 32.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 32.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 32.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 31.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 31.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 31.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 31.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 30.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 30.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 30.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 30.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 30.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 29.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 29.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 29.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 29.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 29.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 29.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 29.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 29.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 29.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 29.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 29.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 29.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 29.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 29.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 29.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 28.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 28.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 28.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 28.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 28.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 28.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 28.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 28.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 28.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 27.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 27.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 27.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 27.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 27.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 27.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 27.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 27.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 27.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 27.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 27.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 27.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 27.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 27.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 26.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 26.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 26.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 26.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 26.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 26.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 26.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 26.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 26.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 26.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 26.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 26.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 26.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 26.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 26.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 26.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 26.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 26.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 26.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 26.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 25.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 25.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 25.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 25.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 25.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 25.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 25.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 25.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 25.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 25.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 24.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 24.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 24.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 24.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 24.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 24.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 24.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 24.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 24.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 24.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 24.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 24.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 23.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 23.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 23.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 23.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 23.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 23.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 23.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 23.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 23.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 23.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 23.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 23.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 22.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 22.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 22.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 22.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 22.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 22.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 22.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 22.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 22.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 22.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 21.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 21.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 21.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 21.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 21.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 21.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 20.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 20.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 20.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 19.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 18.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 17.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 15.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 106.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 106.8
FF:10159-103A6 76 years, female 150.2
FF:10181-103D1 60 years, female 63.4

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