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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:53.1 nTPM
HPA:53.1 nTPM
GTEx:35.0 nTPM
FANTOM5:139.8 Scaled Tags Per Million
Pig:70.1 nTPM
Mouse:57.3 nTPM
Allen mouse:3.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA038089
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 53.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 38.1
2846 Female, age 79, unknown 49.3
2289 Male, age 61, right hemisphere 48.7
2290 Female, age 72, unknown 47.8
1857 Female, age 85, left hemisphere 40.7
1854 Male, age 80, left hemisphere 34.1
2288 Male, age 75, left hemisphere 32.0
2481 Female, age 94, left hemisphere 29.4
1781 Male, age 74, unknown 23.0
Claustrum
nTPM: 6.5
2568 Male, age 61, both hemispheres 13.7
2392 Female, age 94, both hemispheres 8.6
2645 Female, age 72, unknown 8.1
2284 Female, age 91, both hemispheres 7.7
2491 Male, age 75, both hemispheres 6.7
2198 Male, age 80, both hemispheres 6.3
2196 Female, age 79, unknown 4.7
1956 Male, age 74, unknown 2.7
2292 Female, age 85, both hemispheres 0.0
Globus pallidus, externus
nTPM: 10.9
2646 Male, age 61, right hemisphere 23.1
2567 Female, age 72, unknown 9.8
2772 Female, age 79, unknown 8.8
2395 Male, age 75, both hemispheres 7.8
1996 Male, age 80, right hemisphere 4.8
Globus pallidus, internus
nTPM: 9.4
2483 Female, age 94, right hemisphere 18.4
1818 Male, age 74, unknown 14.1
2566 Female, age 72, unknown 8.0
2037 Male, age 80, right hemisphere 7.6
2287 Male, age 75, right hemisphere 7.1
2111 Female, age 85, right hemisphere 5.8
2778 Female, age 91, both hemispheres 4.8
Nucleus accumbens
nTPM: 28.1
1856 Female, age 91, right hemisphere 44.4
2824 Male, age 61, right hemisphere 36.6
1783 Male, age 74, unknown 32.6
1806 Female, age 85, left hemisphere 31.4
2286 Male, age 75, left hemisphere 29.1
2391 Female, age 94, left hemisphere 21.1
2698 Female, age 72, unknown 19.3
2732 Male, age 80, right hemisphere 10.2
Nucleus basalis of Meynert
nTPM: 33.4
2393 Male, age 80, right hemisphere 45.9
2484 Female, age 94, left hemisphere 43.2
2569 Male, age 61, both hemispheres 27.2
2821 Male, age 75, both hemispheres 17.1
Nucleus of the diagonal band
nTPM: 24.3
2195 Female, age 85, both hemispheres 30.5
1812 Female, age 91, both hemispheres 29.1
2775 Male, age 80, right hemisphere 25.7
2029 Male, age 61, right hemisphere 22.2
1979 Male, age 74, unknown 14.2
Olfactory tubercle
nTPM: 18.5
2487 Female, age 94, left hemisphere 19.9
1846 Male, age 80, right hemisphere 18.4
2856 Male, age 75, right hemisphere 18.1
1998 Female, age 91, both hemispheres 17.6
Putamen
nTPM: 53.1
2489 Female, age 72, unknown 69.0
2466 Female, age 79, unknown 67.1
1829 Male, age 74, unknown 65.8
1838 Male, age 80, right hemisphere 55.3
1937 Female, age 91, right hemisphere 42.3
2647 Male, age 75, left hemisphere 39.1
2482 Female, age 94, left hemisphere 33.4
Septal nuclei
nTPM: 22.3
1960 Male, age 74, unknown 38.9
2059 Female, age 85, both hemispheres 29.8
2031 Female, age 72, unknown 25.0
2009 Female, age 91, both hemispheres 22.7
2394 Male, age 61, left hemisphere 17.5
2629 Female, age 94, right hemisphere 16.6
2199 Male, age 80, right hemisphere 5.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 35.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 31.9
Samples: 246

Max nTPM: 56.2
Min nTPM: 11.0
Std nTPM: 9.0
Median nTPM: 32.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 54.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 54.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 54.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 53.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 50.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 49.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 49.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 48.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 47.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 47.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 45.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 45.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 45.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 44.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 44.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 44.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 44.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 43.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 43.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 43.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 43.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 43.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 43.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 43.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 43.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 42.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 42.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 42.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 42.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 42.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 41.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 41.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 41.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 41.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 41.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 40.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 40.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 40.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 40.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 40.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 39.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 39.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 39.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 39.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 39.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 39.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 39.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 39.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 38.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 38.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 38.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 37.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 37.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 37.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 37.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 37.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 37.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 36.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 36.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 36.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 36.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 36.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 36.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 36.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 36.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 36.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 36.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 35.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 35.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 35.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 35.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 35.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 35.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 35.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 35.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 35.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 34.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 34.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 34.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 34.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 34.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 34.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 34.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 34.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 34.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 34.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 34.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 34.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 33.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 33.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 33.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 33.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 32.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 32.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 32.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 32.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 32.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 32.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 32.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 32.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 32.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 32.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 32.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 32.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 32.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 32.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 31.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 31.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 31.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 31.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 31.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 31.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 31.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 31.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 30.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 30.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 30.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 30.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 30.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 30.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 29.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 29.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 29.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 29.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 29.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 29.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 29.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 29.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 29.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 29.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 29.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 29.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 29.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 29.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 28.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 28.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 28.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 28.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 28.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 28.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 28.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 28.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 28.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 28.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 28.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 27.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 27.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 27.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 27.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 27.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 27.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 26.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 26.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 26.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 26.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 26.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 26.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 25.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 25.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 25.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 25.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 25.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 25.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 25.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 25.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 25.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 24.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 24.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 24.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 24.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 24.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 24.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 24.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 23.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 23.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 23.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 23.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 23.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 23.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 23.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 22.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 22.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 22.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 22.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 22.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 22.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 21.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 20.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 20.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 20.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 20.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 20.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 20.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 20.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 19.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 19.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 19.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 19.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 19.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 18.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 18.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 18.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 18.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 18.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 17.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 17.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 17.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 17.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 16.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 16.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 16.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 15.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 15.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 11.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 11.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 26.1
Samples: 246

Max nTPM: 50.7
Min nTPM: 8.5
Std nTPM: 6.3
Median nTPM: 26.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 50.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 45.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 42.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 41.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 41.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 39.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 36.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 36.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 36.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 36.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 35.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 35.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 35.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 34.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 34.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 34.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 34.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 34.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 34.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 34.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 33.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 33.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 33.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 33.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 33.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 33.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 33.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 32.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 32.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 32.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 32.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 32.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 32.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 32.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 32.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 32.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 32.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 32.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 31.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 31.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 31.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 31.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 31.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 31.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 31.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 31.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 31.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 30.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 30.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 30.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 30.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 30.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 30.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 30.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 30.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 30.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 30.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 30.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 30.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 29.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 29.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 29.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 29.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 29.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 29.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 29.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 29.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 29.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 29.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 29.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 29.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 29.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 29.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 29.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 29.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 28.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 28.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 28.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 28.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 28.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 28.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 28.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 28.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 28.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 28.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 28.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 28.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 28.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 28.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 28.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 28.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 28.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 28.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 28.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 28.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 28.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 28.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 28.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 27.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 27.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 27.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 27.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 27.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 27.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 27.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 27.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 27.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 27.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 27.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 27.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 27.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 27.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 27.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 27.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 27.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 27.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 26.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 26.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 26.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 26.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 26.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 26.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 26.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 26.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 26.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 26.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 26.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 26.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 26.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 26.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 26.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 25.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 25.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 25.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 25.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 25.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 25.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 25.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 25.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 25.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 25.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 25.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 25.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 25.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 25.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 25.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 24.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 24.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 24.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 24.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 24.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 24.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 24.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 24.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 24.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 24.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 23.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 23.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 23.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 23.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 23.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 23.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 23.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 23.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 23.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 23.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 23.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 23.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 23.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 22.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 22.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 22.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 22.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 22.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 22.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 22.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 22.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 22.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 22.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 22.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 22.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 22.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 22.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 22.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 22.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 22.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 22.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 21.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 21.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 21.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 21.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 21.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 20.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 20.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 20.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 20.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 20.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 20.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 20.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 20.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 20.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 19.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 19.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 19.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 18.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 18.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 18.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 18.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 18.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 18.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 18.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 18.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 18.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 17.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 17.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 17.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 17.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 17.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 16.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 16.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 16.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 16.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 16.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 16.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 15.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 14.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 14.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 14.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 14.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 14.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 14.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 14.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 11.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 11.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 10.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 8.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.5
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Brain - Putamen (basal ganglia)
Average nTPM: 35.0
Samples: 205

Max nTPM: 70.1
Min nTPM: 14.1
Std nTPM: 10.3
Median nTPM: 34.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 70.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 62.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 58.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 56.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 54.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 54.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 53.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 51.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 51.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 50.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 50.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 50.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 50.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 49.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 49.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 49.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 49.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 48.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 48.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 47.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 47.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 47.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 47.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 47.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 47.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 46.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 46.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 46.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 45.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 45.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 45.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 45.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 45.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 44.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 44.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 44.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 44.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 44.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 43.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 43.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 43.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 43.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 43.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 43.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 43.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 43.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 43.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 43.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 43.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 42.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 42.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 42.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 42.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 41.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 41.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 41.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 41.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 41.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 41.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 41.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 41.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 40.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 40.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 39.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 39.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 39.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 39.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 39.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 39.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 38.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 38.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 38.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 38.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 37.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 37.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 37.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 37.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 36.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 36.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 36.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 36.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 36.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 36.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 36.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 36.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 36.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 36.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 35.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 35.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 35.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 35.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 35.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 35.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 34.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 34.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 34.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 34.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 34.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 34.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 34.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 33.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 33.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 33.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 33.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 33.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 33.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 33.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 32.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 32.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 32.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 32.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 32.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 32.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 31.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 31.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 31.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 31.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 31.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 31.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 31.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 30.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 30.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 30.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 29.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 29.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 29.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 29.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 29.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 29.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 29.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 29.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 29.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 29.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 28.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 28.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 28.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 28.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 28.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 28.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 28.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 28.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 28.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 28.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 27.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 27.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 27.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 27.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 27.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 27.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 26.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 26.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 25.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 25.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 25.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 25.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 24.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 24.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 24.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 24.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 24.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 24.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 24.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 23.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 23.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 22.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 22.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 21.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 21.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 21.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 21.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 20.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 19.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 19.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 19.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 18.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 18.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 18.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 17.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 17.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 17.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 16.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 15.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 15.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 15.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 14.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 14.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 139.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 107.5
FF:10164-103B2 76 years, female 107.5
Globus pallidus
Scaled Tags Per Million: 67.2
FF:10175-103C4 60 years, female 90.7
FF:10161-103A8 76 years, female 43.7
Nucleus accumbens
Scaled Tags Per Million: 139.8
FF:10037-101F1 23-56 years, mixed 139.8
Putamen
Scaled Tags Per Million: 112.8
FF:10176-103C5 60 years, female 112.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 70.1
Pig sample Sample description nTPM
Caudate
nTPM: 67.9
Samples: 4

Max nTPM: 82.4
Min nTPM: 46.3
Sample A Female 46.3
Sample B Female 63.5
Sample C Male 79.5
Sample D Male 82.4
Putamen
nTPM: 70.1
Samples: 4

Max nTPM: 93.5
Min nTPM: 25.2
Sample A Female 25.2
Sample B Female 70.4
Sample C Male 93.5
Sample D Male 91.3
Septum
nTPM: 21.5
Samples: 4

Max nTPM: 32.8
Min nTPM: 9.0
Sample A Female 27.0
Sample B Female 32.8
Sample C Male 17.1
Sample D Male 9.0
Ventral pallidum
nTPM: 42.9
Samples: 4

Max nTPM: 52.3
Min nTPM: 29.0
Sample A Female 52.3
Sample B Female 42.4
Sample C Male 29.0
Sample D Male 47.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 57.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 57.3
Samples: 4

Max nTPM: 59.2
Min nTPM: 54.6
Sample A Male 59.2
Sample B Male 58.3
Sample C Female 57.0
Sample D Female 54.6
Septum
nTPM: 40.0
Samples: 4

Max nTPM: 47.1
Min nTPM: 35.8
Sample A Male 47.1
Sample B Male 35.8
Sample C Female 38.2
Sample D Female 38.7
Ventral forebrain
nTPM: 54.2
Samples: 4

Max nTPM: 57.4
Min nTPM: 47.8
Sample A Male 56.3
Sample B Male 55.2
Sample C Female 47.8
Sample D Female 57.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.0
74958645 Antisense, RP_060315_05_B11, Mouse strain C57BL/6J (56 days, male) 3.5
70230861 Antisense, RP_050524_04_F10, Mouse strain C57BL/6J (56 days, male) 2.4
Pallidum
Expression energy: 2.8
74958645 Antisense, RP_060315_05_B11, Mouse strain C57BL/6J (56 days, male) 3.3
70230861 Antisense, RP_050524_04_F10, Mouse strain C57BL/6J (56 days, male) 2.3

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