COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.1 nTPM
HPA:29.1 nTPM
GTEx:39.1 nTPM
FANTOM5:49.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA039722Antibody HPA040155
Endothelial cells HighNot detected
Glandular cells MediumMedium
Peripheral nerve/ganglion MediumLow





COLON - HPA RNA-seqi
Average nTPM 29.1
overview
Male, age 54 		Colon sample 67
nTPM: 22.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 22.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 31.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 34.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 17.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 20.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 35.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 31.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 24.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 30.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 31.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 28
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 47.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 39.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 35.6
Samples: 373

Max nTPM: 71.4
Min nTPM: 17.0
Std nTPM: 10.3
Median nTPM: 34.1
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 71.4
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 70.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 69.1
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 66.9
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 65.7
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 62.5
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 62.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 61.7
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 61.6
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 60.5
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 60.1
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Colon - Transverse
Average nTPM: 39.1
Samples: 406

Max nTPM: 100.5
Min nTPM: 13.0
Std nTPM: 15.5
Median nTPM: 35.6
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 100.5
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 96.2
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 86.3
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 85.5
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 83.9
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 83.7
GTEX-14JIY-3326-SM-6871E 60-69 years, male 81.3
GTEX-1JKYN-2326-SM-CGQG7 30-39 years, male 80.7
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 80.1
GTEX-1LG7Z-1426-SM-CXKYV 30-39 years, male 78.8
GTEX-R55D-1826-SM-48FEF 50-59 years, male 78.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 49.1
FF:10014-101C5 62,83,84 years, mixed 49.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.