HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.4 nTPM
HPA:23.4 nTPM
GTEx:39.0 nTPM
FANTOM5:165.9 Scaled Tags Per Million
Pig:44.9 nTPM
Mouse:71.8 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003028
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.5
2148 Female, age 91, left hemisphere 24.9
2529 Female, age 94, left hemisphere 22.8
1855 Male, age 76, left hemisphere 22.1
1911 Female, age 85, right hemisphere 22.0
2621 Female, age 67, right hemisphere 21.7
1898 Male, age 80, left hemisphere 21.5
Dentate gyrus
nTPM: 23.4
2531 Female, age 67, both hemispheres 25.3
2528 Male, age 74, both hemispheres 24.3
2010 Male, age 76, both hemispheres 23.7
1927 Female, age 91, both hemispheres 23.5
2246 Female, age 85, both hemispheres 22.1
2530 Female, age 94, left hemisphere 21.3
Entorhinal gyrus
nTPM: 22.2
2613 Female, age 94, left hemisphere 23.3
2764 Male, age 80, right hemisphere 22.6
1938 Female, age 85, left hemisphere 22.5
2686 Male, age 75, right hemisphere 22.0
2117 Female, age 91, right hemisphere 21.7
1787 Male, age 76, left hemisphere 21.1
Hippocampus, CA1
nTPM: 23.1
2045 Male, age 76, both hemispheres 25.2
1873 Female, age 85, both hemispheres 23.4
2082 Female, age 91, right hemisphere 22.9
2527 Male, age 74, both hemispheres 22.7
2749 Male, age 80, left hemisphere 21.3
Hippocampus, CA2
nTPM: 22.5
2113 Female, age 91, right hemisphere 23.2
1963 Male, age 80, left hemisphere 23.1
1940 Female, age 85, left hemisphere 22.8
1892 Male, age 76, both hemispheres 22.5
2249 Male, age 74, both hemispheres 22.0
2437 Female, age 94, left hemisphere 21.0
Hippocampus, CA3
nTPM: 22.8
2620 Female, age 94, left hemisphere 24.0
2861 Female, age 67, both hemispheres 23.0
2137 Male, age 80, left hemisphere 22.8
2436 Male, age 74, both hemispheres 22.7
1891 Female, age 85, both hemispheres 22.5
1867 Male, age 76, both hemispheres 21.6
Parahippocampal cortex
nTPM: 23.0
1933 Female, age 85, both hemispheres 23.8
2018 Male, age 76, both hemispheres 23.6
2693 Female, age 94, both hemispheres 23.5
2245 Female, age 91, both hemispheres 23.3
2250 Female, age 67, right hemisphere 23.2
2692 Male, age 74, both hemispheres 23.2
2622 Female, age 67, right hemisphere 22.9
1990 Female, age 91, right hemisphere 22.4
1850 Male, age 80, both hemispheres 22.0
2532 Female, age 72, left hemisphere 21.8
Perirhinal gyrus
nTPM: 22.2
1847 Female, age 91, left hemisphere 22.8
1841 Female, age 85, right hemisphere 22.6
2521 Female, age 94, right hemisphere 21.9
2848 Male, age 76, right hemisphere 21.8
1794 Male, age 80, right hemisphere 21.7
Subiculum
nTPM: 22.3
2042 Male, age 76, both hemispheres 23.6
2729 Female, age 91, right hemisphere 23.4
2619 Male, age 74, both hemispheres 22.6
1901 Male, age 80, both hemispheres 21.6
2438 Female, age 94, left hemisphere 21.6
1977 Female, age 85, both hemispheres 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.0
Samples: 197

Max nTPM: 114.4
Min nTPM: 12.2
Std nTPM: 16.8
Median nTPM: 36.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 114.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 90.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 88.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 85.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 80.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 75.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 75.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 70.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 69.5
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 68.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 68.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 165.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 165.9
FF:10169-103B7 60 years, female 196.7
FF:10153-102I9 76 years, female 135.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 55.5
Min nTPM: 35.4
Sample A Female 55.5
Sample B Female 43.9
Sample C Male 44.7
Sample D Male 35.4
Entorhinal cortex
nTPM: 37.3
Samples: 4

Max nTPM: 43.3
Min nTPM: 28.4
Sample A Female 43.3
Sample B Female 37.7
Sample C Male 39.7
Sample D Male 28.4
Subiculum
nTPM: 38.9
Samples: 4

Max nTPM: 51.3
Min nTPM: 32.0
Sample A Female 51.3
Sample B Female 37.0
Sample C Male 35.2
Sample D Male 32.0
Ventral hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 50.5
Min nTPM: 33.1
Sample A Female 42.5
Sample B Female 33.1
Sample C Male 50.5
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.9
Samples: 4

Max nTPM: 71.0
Min nTPM: 60.3
Sample A Male 60.6
Sample B Male 60.3
Sample C Female 67.6
Sample D Female 71.0
Hippocampal formation
nTPM: 71.8
Samples: 4

Max nTPM: 75.2
Min nTPM: 68.5
Sample A Male 75.2
Sample B Male 68.5
Sample C Female 74.1
Sample D Female 69.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
69174022 Antisense, RP_050329_01_G08, Mouse strain C57BL/6J (56 days, male) 9.0

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