SMG1

CEREBRAL CORTEX - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.7 FPKM
GTEx:4.5 RPKM

CEREBRAL CORTEX - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006870

 

Antibody HPA031623

 

Endothelial cells

Low   Low  

Glial cells

High   Not detected  

Neuronal cells

High   Medium  

Neuropil

Medium   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

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Average FPKM

6.7

N/A Male, age 5
Sample 1
FPKM: 7.4
overview Female, age 40
Sample 2
FPKM: 7.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
FPKM: 5.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

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Average RPKM

4.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 4.7
Samples: 114

Max RPKM: 19.4
Min RPKM: 2.1
Std RPKM: 1.8
Median RPKM: 4.4
GTEX-11OF3-2926-SM-5HL78 19.4
GTEX-UTHO-3026-SM-3GAFB 8.7
GTEX-NPJ8-1526-SM-2D7VU 8.5
GTEX-13FXS-3126-SM-5J2NN 8.5
GTEX-1192X-3126-SM-5N9BY 7.9
GTEX-13G51-3026-SM-5IJB8 7.7
GTEX-QMR6-1426-SM-32PLA 7.4
GTEX-PVOW-2526-SM-2XCF7 7.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 4.4
Samples: 108

Max RPKM: 9.2
Min RPKM: 1.6
Std RPKM: 1.3
Median RPKM: 4.2
GTEX-QDT8-0011-R10A-SM-32PKG 9.2
GTEX-WWYW-0011-R10A-SM-3NB35 7.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 7.6
GTEX-X4XX-0011-R10B-SM-46MWO 7.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 7.3
GTEX-X585-0011-R10A-SM-46MUY 7.3
GTEX-13N2G-0011-R10a-SM-5MR34 7.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 6.8
Show all