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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3070.0 nTPM
HPA Brain:3376.0 nTPM
GTEx:3070.0 nTPM
Pig:2111.7 nTPM
Mouse:2419.3 nTPM
Allen mouse:8.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3376.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 3376.0
2226 Male, age 75, left hemisphere 4834.6
1961 Female, age 42, unknown 1917.4
Dorsomedial nucleus
nTPM: 1632.4
2041 Female, age 72, unknown 1878.1
2017 Female, age 42, unknown 1707.2
1989 Male, age 62, unknown 1311.9
Lateral hypothalamic area
nTPM: 2026.9
2228 Male, age 66, unknown 3134.4
1791 Male, age 80, right hemisphere 2151.3
2412 Male, age 62, unknown 1428.4
2271 Male, age 75, both hemispheres 1393.6
Mammillary body
nTPM: 1425.0
1923 Female, age 72, unknown 2235.1
1948 Female, age 72, unknown 1333.0
1834 Female, age 42, unknown 1306.6
2413 Male, age 66, unknown 1139.5
1945 Male, age 80, right hemisphere 1110.7
Paraventricular nucleus
nTPM: 1834.5
2700 Male, age 62, unknown 1834.5
Preoptic area
nTPM: 1783.4
1907 Male, age 80, right hemisphere 2460.9
1861 Female, age 42, unknown 1624.3
2414 Female, age 72, unknown 1265.1
Supraoptic nucleus
nTPM: 1834.6
2835 Female, age 72, unknown 2245.3
1894 Female, age 72, unknown 1823.3
2043 Male, age 62, unknown 1435.2
Ventromedial nucleus
nTPM: 1729.5
1822 Female, age 42, unknown 1738.8
1982 Female, age 72, unknown 1720.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3070.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 3070.0
Samples: 257

Max nTPM: 7066.7
Min nTPM: 863.6
Std nTPM: 1229.2
Median nTPM: 2926.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 7066.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 6908.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 6179.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 6167.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 6101.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 5925.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 5867.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 5698.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 5662.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 5561.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 5545.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 5490.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 5461.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 5409.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 5377.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 5314.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 5278.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 5228.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 5151.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 5024.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 4996.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 4951.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 4948.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 4921.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 4823.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 4807.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 4757.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 4737.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 4715.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 4493.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 4492.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 4474.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 4439.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 4427.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 4415.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 4392.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 4364.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 4312.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 4311.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 4288.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 4285.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 4283.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 4270.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 4246.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 4230.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 4221.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 4157.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 4147.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 4142.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 4139.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 4110.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 4109.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 4100.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 4055.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 4007.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 3967.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 3945.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 3899.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 3867.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 3866.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 3853.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 3820.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 3820.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 3819.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 3815.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 3810.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 3801.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 3754.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 3751.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 3740.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 3739.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 3739.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 3680.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 3635.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 3593.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 3568.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 3551.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 3523.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 3521.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 3513.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 3506.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 3486.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 3478.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 3477.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 3445.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 3435.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 3431.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 3419.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 3406.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 3397.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 3393.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 3386.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 3376.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 3359.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 3313.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 3307.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 3295.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 3294.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 3290.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 3281.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 3272.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 3256.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 3253.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 3233.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 3214.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 3197.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 3194.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 3189.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 3167.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 3155.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 3144.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 3134.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 3121.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 3120.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 3112.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 3096.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 3088.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 3081.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 3075.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 3039.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 3024.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 3010.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 3007.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 3001.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 2977.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 2963.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 2953.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 2932.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 2926.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 2922.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 2921.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 2871.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 2861.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 2856.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 2818.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 2818.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 2800.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 2799.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 2790.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 2784.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 2783.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 2781.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 2770.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 2764.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 2754.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 2726.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 2720.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2714.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 2712.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2688.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 2685.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 2683.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 2680.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 2680.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 2678.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 2652.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 2645.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 2642.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 2642.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 2616.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 2588.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 2562.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 2554.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 2529.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 2514.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 2507.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 2495.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 2491.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 2489.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 2479.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 2464.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 2452.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 2445.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 2442.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2412.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 2408.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 2399.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 2396.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 2392.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 2375.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 2354.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 2350.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 2348.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 2322.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 2318.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 2296.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 2285.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 2239.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 2235.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2218.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 2218.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 2193.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 2190.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 2189.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 2167.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 2157.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 2135.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 2123.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 2122.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 2082.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 2076.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 2068.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 2030.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 2027.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 2021.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 2019.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 2011.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 2003.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1987.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1981.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1973.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1962.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 1960.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1950.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1948.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1912.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1888.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1861.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1844.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1834.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1822.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1799.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1789.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1778.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 1720.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1717.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1695.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1657.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1625.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1593.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1539.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1518.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1508.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1491.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1448.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1434.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1416.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1376.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1360.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1351.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1330.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1298.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1296.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1276.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1251.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1136.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1129.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 1113.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1080.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1048.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 971.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 971.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 949.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 924.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 900.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 894.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 863.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2111.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2111.7
Samples: 4

Max nTPM: 2567.0
Min nTPM: 1757.0
Sample A Female 2567.0
Sample B Female 1757.0
Sample C Male 2116.5
Sample D Male 2006.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2419.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2419.3
Samples: 4

Max nTPM: 2548.3
Min nTPM: 2296.4
Sample A Male 2448.9
Sample B Male 2383.5
Sample C Female 2548.3
Sample D Female 2296.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.4
509 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 16.9
510 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 14.0
70230813 Antisense, RP_050524_04_E07, Mouse strain C57BL/6J (56 days, male) 0.0

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