HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:1031.3 nTPM
HPA Brain:303.0 nTPM
GTEx:1031.3 nTPM
FANTOM5:213.7 Scaled Tags Per Million
Pig:397.7 nTPM
Mouse:653.7 nTPM
Allen mouse:4.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047268Antibody HPA048084
Glial cells MediumNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 303.0
Sample id Sample description nTPM
Hippocampus
nTPM: 303.0
2529 Female, age 94, left hemisphere 359.1
1898 Male, age 80, left hemisphere 351.2
2621 Female, age 67, right hemisphere 290.2
2148 Female, age 91, left hemisphere 286.6
1911 Female, age 85, right hemisphere 270.5
1855 Male, age 76, left hemisphere 260.1
Dentate gyrus
nTPM: 292.8
2530 Female, age 94, left hemisphere 364.3
2010 Male, age 76, both hemispheres 335.3
2531 Female, age 67, both hemispheres 283.6
2246 Female, age 85, both hemispheres 276.6
2528 Male, age 74, both hemispheres 248.8
1927 Female, age 91, both hemispheres 247.9
Entorhinal gyrus
nTPM: 276.0
2686 Male, age 75, right hemisphere 340.6
2117 Female, age 91, right hemisphere 289.5
1787 Male, age 76, left hemisphere 287.8
2764 Male, age 80, right hemisphere 270.1
1938 Female, age 85, left hemisphere 260.8
2613 Female, age 94, left hemisphere 206.9
Hippocampus, CA1
nTPM: 276.0
2749 Male, age 80, left hemisphere 306.5
2527 Male, age 74, both hemispheres 275.6
2082 Female, age 91, right hemisphere 273.8
2045 Male, age 76, both hemispheres 262.3
1873 Female, age 85, both hemispheres 261.9
Hippocampus, CA2
nTPM: 282.7
1963 Male, age 80, left hemisphere 346.0
1892 Male, age 76, both hemispheres 290.7
2437 Female, age 94, left hemisphere 289.3
1940 Female, age 85, left hemisphere 261.5
2113 Female, age 91, right hemisphere 255.5
2249 Male, age 74, both hemispheres 253.1
Hippocampus, CA3
nTPM: 258.7
1867 Male, age 76, both hemispheres 318.0
1891 Female, age 85, both hemispheres 277.5
2861 Female, age 67, both hemispheres 275.9
2137 Male, age 80, left hemisphere 269.3
2620 Female, age 94, left hemisphere 207.4
2436 Male, age 74, both hemispheres 204.4
Parahippocampal cortex
nTPM: 248.0
2018 Male, age 76, both hemispheres 346.4
2250 Female, age 67, right hemisphere 267.6
1850 Male, age 80, both hemispheres 252.9
1990 Female, age 91, right hemisphere 250.8
2532 Female, age 72, left hemisphere 247.5
2245 Female, age 91, both hemispheres 246.0
1933 Female, age 85, both hemispheres 244.5
2692 Male, age 74, both hemispheres 239.3
2622 Female, age 67, right hemisphere 211.4
2693 Female, age 94, both hemispheres 173.8
Perirhinal gyrus
nTPM: 265.9
1841 Female, age 85, right hemisphere 295.2
1847 Female, age 91, left hemisphere 280.7
1794 Male, age 80, right hemisphere 270.6
2848 Male, age 76, right hemisphere 246.5
2521 Female, age 94, right hemisphere 236.3
Subiculum
nTPM: 285.4
2438 Female, age 94, left hemisphere 316.3
2042 Male, age 76, both hemispheres 313.9
1977 Female, age 85, both hemispheres 310.3
1901 Male, age 80, both hemispheres 273.0
2729 Female, age 91, right hemisphere 255.8
2619 Male, age 74, both hemispheres 243.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1031.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1031.3
Samples: 255

Max nTPM: 2849.5
Min nTPM: 504.0
Std nTPM: 363.3
Median nTPM: 944.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2849.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2617.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2365.5
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 2188.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2148.2
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2080.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1992.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1931.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1869.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1844.8
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1829.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 213.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 213.7
FF:10169-103B7 60 years, female 213.9
FF:10153-102I9 76 years, female 213.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 397.7
Pig sample Sample description nTPM
Subiculum
nTPM: 319.9
Samples: 4

Max nTPM: 458.3
Min nTPM: 243.1
Sample A Female 458.3
Sample B Female 288.5
Sample C Male 243.1
Sample D Male 289.6
Dorsal hippocampus
nTPM: 397.7
Samples: 4

Max nTPM: 535.9
Min nTPM: 252.7
Sample A Female 535.9
Sample B Female 367.2
Sample C Male 435.1
Sample D Male 252.7
Entorhinal cortex
nTPM: 336.3
Samples: 4

Max nTPM: 407.7
Min nTPM: 230.5
Sample A Female 310.1
Sample B Female 396.7
Sample C Male 407.7
Sample D Male 230.5
Ventral hippocampus
nTPM: 347.5
Samples: 4

Max nTPM: 404.9
Min nTPM: 289.9
Sample A Female 368.2
Sample B Female 289.9
Sample C Male 404.9
Sample D Male 326.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 653.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 641.2
Samples: 4

Max nTPM: 657.0
Min nTPM: 614.5
Sample A Male 614.5
Sample B Male 657.0
Sample C Female 654.8
Sample D Female 638.6
Hippocampal formation
nTPM: 653.7
Samples: 4

Max nTPM: 718.0
Min nTPM: 569.0
Sample A Male 708.6
Sample B Male 619.1
Sample C Female 569.0
Sample D Female 718.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
70473987 Antisense, RP_050614_04_F10, Mouse strain C57BL/6J (56 days, male) 4.6

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