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  • TISSUE

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  • RPS10
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:935.0 nTPM
HPA Brain:359.7 nTPM
GTEx:935.0 nTPM
Pig:392.5 nTPM
Mouse:607.1 nTPM
Allen mouse:1.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

359.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 326.4
1961 Female, age 42, unknown 354.7
2226 Male, age 75, left hemisphere 298.1
Dorsomedial nucleus
nTPM: 308.3
2041 Female, age 72, unknown 316.3
2017 Female, age 42, unknown 309.9
1989 Male, age 62, unknown 298.6
Lateral hypothalamic area
nTPM: 343.6
1791 Male, age 80, right hemisphere 379.6
2228 Male, age 66, unknown 353.4
2412 Male, age 62, unknown 345.0
2271 Male, age 75, both hemispheres 296.3
Mammillary body
nTPM: 320.5
1945 Male, age 80, right hemisphere 361.2
1948 Female, age 72, unknown 353.8
1923 Female, age 72, unknown 313.8
1834 Female, age 42, unknown 297.0
2413 Male, age 66, unknown 276.6
Paraventricular nucleus
nTPM: 314.3
2700 Male, age 62, unknown 314.3
Preoptic area
nTPM: 312.0
1861 Female, age 42, unknown 347.7
1907 Male, age 80, right hemisphere 295.8
2414 Female, age 72, unknown 292.5
Supraoptic nucleus
nTPM: 359.7
1894 Female, age 72, unknown 382.8
2043 Male, age 62, unknown 367.6
2835 Female, age 72, unknown 328.6
Ventromedial nucleus
nTPM: 342.5
1982 Female, age 72, unknown 390.7
1822 Female, age 42, unknown 294.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

935.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 935.0
Samples: 257

Max nTPM: 3906.2
Min nTPM: 421.7
Std nTPM: 396.6
Median nTPM: 840.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3906.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2948.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2939.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2487.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2398.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1925.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1836.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1808.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1705.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1698.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1654.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1529.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1522.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1516.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1509.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1491.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1467.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1450.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1394.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1386.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1382.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1379.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1373.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1368.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1358.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1357.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1355.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1318.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1309.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1293.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1288.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1279.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1263.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1262.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1261.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1259.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1242.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1242.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1228.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1227.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1220.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1181.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1166.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1153.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1146.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1132.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1132.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1131.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1116.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1114.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1100.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1090.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1086.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1086.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1082.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1078.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1070.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1059.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1058.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1053.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1052.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1051.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1051.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1042.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1035.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1035.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1033.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 1028.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1012.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1006.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1005.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 998.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 993.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 983.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 981.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 972.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 972.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 972.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 961.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 959.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 959.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 949.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 948.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 943.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 943.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 938.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 936.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 932.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 927.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 924.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 922.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 917.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 917.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 913.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 913.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 911.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 910.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 909.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 909.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 908.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 902.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 901.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 900.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 897.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 894.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 893.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 892.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 891.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 890.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 888.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 881.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 879.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 878.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 875.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 874.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 872.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 871.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 871.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 871.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 869.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 865.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 865.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 863.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 856.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 849.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 846.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 846.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 843.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 840.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 840.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 839.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 836.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 833.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 828.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 824.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 819.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 819.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 819.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 815.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 814.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 811.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 811.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 808.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 808.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 804.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 804.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 798.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 798.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 798.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 797.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 796.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 793.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 793.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 790.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 788.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 788.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 787.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 786.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 785.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 785.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 783.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 780.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 779.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 776.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 775.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 774.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 774.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 765.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 764.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 764.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 763.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 762.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 758.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 755.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 753.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 752.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 749.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 748.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 748.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 747.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 744.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 742.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 731.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 731.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 730.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 729.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 727.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 727.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 726.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 725.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 718.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 713.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 712.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 710.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 708.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 707.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 706.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 703.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 702.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 701.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 696.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 693.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 690.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 689.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 688.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 687.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 684.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 680.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 676.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 675.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 672.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 671.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 670.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 669.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 666.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 664.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 660.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 653.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 651.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 645.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 644.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 640.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 634.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 634.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 633.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 631.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 629.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 621.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 621.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 619.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 617.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 616.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 610.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 608.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 607.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 599.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 598.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 596.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 596.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 595.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 594.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 587.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 579.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 571.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 565.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 550.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 545.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 527.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 524.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 516.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 498.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 494.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 477.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 475.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 449.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 426.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 421.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

392.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 392.5
Samples: 4

Max nTPM: 554.8
Min nTPM: 249.3
Sample A Female 554.8
Sample B Female 377.3
Sample C Male 388.6
Sample D Male 249.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

607.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 607.1
Samples: 4

Max nTPM: 784.5
Min nTPM: 520.0
Sample A Male 600.1
Sample B Male 784.5
Sample C Female 520.0
Sample D Female 523.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.6
70473987 Antisense, RP_050614_04_F10, Mouse strain C57BL/6J (56 days, male) 1.6

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