AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:49.6 nTPM
HPA:49.6 nTPM
GTEx:37.8 nTPM
FANTOM5:49.5 Scaled Tags Per Million
Pig:38.0 nTPM
Mouse:51.5 nTPM
Allen mouse:8.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 49.6
Sample id Sample description nTPM
Amygdala
nTPM: 47.3
2814 Male, age 76, right hemisphere 60.5
2514 Male, age 75, right hemisphere 50.0
2695 Female, age 67, right hemisphere 49.8
2517 Female, age 94, left hemisphere 40.1
1987 Female, age 91, left hemisphere 36.0
Basal amygdala
nTPM: 41.9
2827 Female, age 67, right hemisphere 48.0
1955 Male, age 76, both hemispheres 45.2
2685 Female, age 94, left hemisphere 43.6
2110 Male, age 80, left hemisphere 41.2
2609 Male, age 75, right hemisphere 41.2
2243 Female, age 91, right hemisphere 31.8
Central amygdala
nTPM: 48.7
1905 Male, age 76, both hemispheres 61.8
2826 Female, age 94, left hemisphere 54.3
2515 Male, age 75, right hemisphere 43.9
2701 Female, age 91, right hemisphere 43.2
2239 Male, age 80, left hemisphere 40.1
Corticomedial amygdala
nTPM: 37.2
2428 Male, age 75, right hemisphere 45.0
2240 Male, age 76, both hemispheres 41.8
2429 Female, age 94, left hemisphere 38.5
2535 Female, age 67, right hemisphere 35.3
2829 Male, age 80, left hemisphere 33.6
2242 Female, age 91, right hemisphere 28.9
Lateral amygdala
nTPM: 49.6
2830 Female, age 67, right hemisphere 56.8
2516 Male, age 75, right hemisphere 54.8
1883 Male, age 76, both hemispheres 54.2
2534 Female, age 94, left hemisphere 49.1
2256 Male, age 80, left hemisphere 42.5
2255 Female, age 91, right hemisphere 40.0
Stria terminalis, bed nucleus
nTPM: 38.5
2201 Male, age 74, unknown 40.6
1974 Female, age 91, both hemispheres 38.9
2486 Female, age 94, both hemispheres 36.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 37.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 37.8
Samples: 152

Max nTPM: 131.9
Min nTPM: 4.0
Std nTPM: 15.7
Median nTPM: 34.3
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 131.9
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 82.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 75.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 70.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 67.7
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 64.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 63.0
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 62.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 62.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 62.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 62.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 49.5
FF:10151-102I7 76 years, female 49.5

AMYGDALA - Pig RNA-seqi
Average nTPM 38.0
Pig sample Sample description nTPM
Amygdala
nTPM: 37.9
Samples: 4

Max nTPM: 46.6
Min nTPM: 33.2
Sample A Female 46.6
Sample B Female 33.2
Sample C Male 35.3
Sample D Male 36.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 51.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 51.5
Samples: 4

Max nTPM: 60.4
Min nTPM: 45.5
Sample A Male 60.4
Sample B Male 45.5
Sample C Female 49.0
Sample D Female 51.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 8.9
70436746 Antisense, RP_050316_01_A03, Mouse strain C57BL/6J (56 days, male) 8.9
69028282 Antisense, RP_050316_01_A03, Mouse strain C57BL/6J (56 days, male) 6.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.