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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
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Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:27.7 nTPM
GTEx:27.7 nTPM
FANTOM5:27.5 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:57.1 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 27.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 27.7
Samples: 105

Max nTPM: 34.3
Min nTPM: 15.1
Std nTPM: 3.1
Median nTPM: 0.0
324_1 76 years, male 34.3
347_1 72 years, male 34.1
375_1 74 years, female 33.9
237_1 82 years, male 33.7
172_1 72 years, female 33.2
352_1 62 years, male 33.0
177_1 74 years, male 32.9
316_1 62 years, male 32.7
173_1 67 years, male 32.2
386_1 76 years, male 31.9
307_1 66 years, female 31.8
447_1 81 years, male 31.7
425_1 59 years, female 31.5
491_1 89 years, female 31.3
350_1 84 years, female 31.2
355_1 70 years, female 31.1
490_1 67 years, female 30.9
9_1 66 years, female 30.5
335_1 73 years, female 30.4
526_1 61 years, male 30.3
396_1 62 years, male 30.2
115_1 83 years, male 30.1
139_1 64 years, female 30.0
318_1 68 years, male 29.9
413_1 59 years, female 29.9
415_1 77 years, female 29.9
321_1 62 years, female 29.8
466_1 57 years, female 29.8
292_1 71 years, male 29.6
142_1 61 years, female 29.4
414_1 84 years, female 29.3
518_1 75 years, female 29.2
81_1 67 years, male 29.1
291_1 76 years, male 29.1
99_1 64 years, male 29.0
43_1 64 years, female 28.9
229_1 69 years, female 28.9
468_1 89 years, male 28.9
506_1 65 years, male 28.9
379_1 60 years, male 28.8
313_1 79 years, female 28.7
163_1 78 years, male 28.6
404_1 82 years, female 28.6
480_1 63 years, male 28.5
348_1 84 years, male 28.4
6_1 73 years, female 28.3
145_1 84 years, male 28.3
246_1 77 years, male 28.3
32_1 67 years, male 28.2
120_1 70 years, female 28.2
149_1 88 years, male 28.2
119_1 70 years, female 28.1
117_1 61 years, male 28.0
41_1 94 years, female 27.8
109_1 81 years, female 27.6
377_1 82 years, female 27.6
18_1 88 years, male 27.5
251_1 78 years, male 27.5
319_1 81 years, male 27.5
389_1 86 years, female 27.5
353_1 82 years, female 27.4
189_1 76 years, male 27.3
35_1 74 years, female 27.2
153_1 70 years, female 27.0
322_1 76 years, male 27.0
286_1 68 years, female 26.9
217_1 76 years, male 26.8
2_1 77 years, female 26.6
243_1 75 years, male 26.5
499_1 55 years, female 26.3
405_1 91 years, male 26.2
406_1 79 years, male 26.2
311_1 78 years, male 26.1
376_1 75 years, female 26.1
218_1 71 years, female 26.0
264_1 73 years, female 26.0
317_1 60 years, male 26.0
320_1 89 years, female 26.0
354_1 81 years, female 25.8
254_1 77 years, female 25.7
265_1 87 years, male 25.7
356_1 87 years, female 25.7
89_1 63 years, male 25.5
314_1 67 years, male 25.4
315_1 62 years, female 25.4
394_1 75 years, female 25.2
384_1 83 years, male 25.1
126_1 63 years, male 25.0
288_1 66 years, female 24.8
349_1 83 years, male 24.8
162_1 79 years, female 24.6
266_1 85 years, male 24.3
517_1 88 years, male 24.2
293_1 68 years, female 24.1
295_1 61 years, female 24.1
501_1 88 years, male 24.0
42_1 85 years, male 23.9
452_1 88 years, female 23.7
503_1 68 years, male 23.5
351_1 91 years, male 23.1
495_1 57 years, female 21.9
4_1 88 years, female 21.4
137_1 83 years, male 21.3
17_1 71 years, male 20.5
308_1 70 years, female 15.1
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 27.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 27.5
FF:10030-101E3 24-65 years, mixed 27.5

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 22.7
Pig sample Sample description nTPM
Retina
nTPM: 22.7
Samples: 4

Max nTPM: 24.9
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 24.9
Sample C Male 22.8
Sample D Male 22.2

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 57.1
Mouse sample Sample description nTPM
Retina
nTPM: 57.1
Samples: 4

Max nTPM: 60.9
Min nTPM: 49.8
Sample A Male 60.8
Sample B Male 56.9
Sample C Female 49.8
Sample D Female 60.9

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by the Knut & Alice Wallenberg Foundation.