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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:67.3 nTPM
HPA:67.3 nTPM
GTEx:38.3 nTPM
FANTOM5:67.9 Scaled Tags Per Million
Pig:53.7 nTPM
Mouse:76.1 nTPM
Allen mouse:5.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA039978
Glial cells Medium
Neuronal cells High


BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 67.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 41.4
2288 Male, age 75, left hemisphere 53.8
2846 Female, age 79, unknown 46.7
1781 Male, age 74, unknown 42.8
2290 Female, age 72, unknown 40.3
1854 Male, age 80, left hemisphere 40.1
1857 Female, age 85, left hemisphere 39.5
2481 Female, age 94, left hemisphere 34.9
2289 Male, age 61, right hemisphere 33.0
Claustrum
nTPM: 50.1
1956 Male, age 74, unknown 58.7
2392 Female, age 94, both hemispheres 58.3
2292 Female, age 85, both hemispheres 56.7
2491 Male, age 75, both hemispheres 54.2
2198 Male, age 80, both hemispheres 47.6
2568 Male, age 61, both hemispheres 45.5
2196 Female, age 79, unknown 45.1
2284 Female, age 91, both hemispheres 43.7
2645 Female, age 72, unknown 41.3
Globus pallidus, externus
nTPM: 63.8
2395 Male, age 75, both hemispheres 66.7
1996 Male, age 80, right hemisphere 66.4
2772 Female, age 79, unknown 65.1
2567 Female, age 72, unknown 61.5
2646 Male, age 61, right hemisphere 59.1
Globus pallidus, internus
nTPM: 67.3
2111 Female, age 85, right hemisphere 81.9
2778 Female, age 91, both hemispheres 80.8
2287 Male, age 75, right hemisphere 72.3
1818 Male, age 74, unknown 62.2
2566 Female, age 72, unknown 61.4
2037 Male, age 80, right hemisphere 57.3
2483 Female, age 94, right hemisphere 55.4
Nucleus accumbens
nTPM: 46.4
2391 Female, age 94, left hemisphere 60.5
2286 Male, age 75, left hemisphere 51.0
2698 Female, age 72, unknown 46.6
2732 Male, age 80, right hemisphere 45.6
2824 Male, age 61, right hemisphere 44.8
1783 Male, age 74, unknown 44.5
1806 Female, age 85, left hemisphere 43.2
1856 Female, age 91, right hemisphere 34.9
Nucleus basalis of Meynert
nTPM: 48.2
2569 Male, age 61, both hemispheres 57.3
2821 Male, age 75, both hemispheres 48.9
2393 Male, age 80, right hemisphere 43.9
2484 Female, age 94, left hemisphere 42.7
Nucleus of the diagonal band
nTPM: 34.3
2029 Male, age 61, right hemisphere 38.2
1979 Male, age 74, unknown 35.4
1812 Female, age 91, both hemispheres 34.1
2775 Male, age 80, right hemisphere 32.9
2195 Female, age 85, both hemispheres 31.0
Olfactory tubercle
nTPM: 35.4
1998 Female, age 91, both hemispheres 37.3
2487 Female, age 94, left hemisphere 35.4
2856 Male, age 75, right hemisphere 34.9
1846 Male, age 80, right hemisphere 34.1
Putamen
nTPM: 47.1
2647 Male, age 75, left hemisphere 58.1
1829 Male, age 74, unknown 50.6
2466 Female, age 79, unknown 48.9
2482 Female, age 94, left hemisphere 46.6
2489 Female, age 72, unknown 44.6
1937 Female, age 91, right hemisphere 43.9
1838 Male, age 80, right hemisphere 37.2
Septal nuclei
nTPM: 36.3
2394 Male, age 61, left hemisphere 48.9
2199 Male, age 80, right hemisphere 38.8
2031 Female, age 72, unknown 36.1
2059 Female, age 85, both hemispheres 33.9
2629 Female, age 94, right hemisphere 33.3
1960 Male, age 74, unknown 32.3
2009 Female, age 91, both hemispheres 30.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 38.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 30.2
Samples: 246

Max nTPM: 66.5
Min nTPM: 11.5
Std nTPM: 8.5
Median nTPM: 29.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 66.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 65.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 62.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 58.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 50.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 48.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 48.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 47.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 46.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 46.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 46.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 46.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 45.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 45.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 44.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 42.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 42.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 41.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 41.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 41.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 41.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 40.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 40.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 40.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 40.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 39.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 39.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 39.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 39.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 38.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 38.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 38.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 38.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 38.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 38.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 38.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 38.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 38.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 37.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 36.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 36.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 36.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 35.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 35.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 35.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 35.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 35.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 35.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 34.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 34.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 34.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 34.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 33.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 33.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 33.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 33.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 33.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 33.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 32.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 32.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 32.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 32.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 32.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 32.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 32.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 32.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 32.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 32.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 32.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 32.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 31.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 31.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 31.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 31.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 31.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 31.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 31.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 31.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 31.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 31.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 31.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 31.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 31.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 30.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 30.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 30.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 30.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 30.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 30.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 30.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 30.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 30.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 30.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 30.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 29.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 29.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 29.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 29.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 29.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 29.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 29.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 29.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 29.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 29.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 29.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 29.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 29.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 28.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 28.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 28.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 28.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 28.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 28.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 28.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 28.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 28.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 28.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 27.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 27.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 27.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 27.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 27.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 27.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 27.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 27.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 27.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 27.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 26.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 26.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 26.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 26.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 26.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 26.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 26.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 26.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 26.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 26.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 26.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 26.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 25.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 25.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 25.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 25.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 25.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 25.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 25.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 25.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 25.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 25.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 25.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 25.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 24.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 24.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 24.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 24.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 24.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 24.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 24.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 24.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 24.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 24.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 24.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 24.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 24.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 24.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 24.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 24.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 24.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 24.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 24.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 24.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 23.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 23.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 23.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 23.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 23.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 23.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 23.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 23.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 23.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 23.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 23.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 23.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 22.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 22.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 22.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 22.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 22.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 22.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 22.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 22.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 22.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 21.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 21.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 21.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 21.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 21.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 21.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 21.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 21.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 21.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 21.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 21.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 21.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 20.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 20.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 20.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 20.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 20.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 20.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 20.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 19.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 19.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 19.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 18.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 17.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 17.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 17.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 15.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 11.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 27.2
Samples: 246

Max nTPM: 122.9
Min nTPM: 6.6
Std nTPM: 12.7
Median nTPM: 25.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 122.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 98.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 86.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 68.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 64.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 61.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 59.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 56.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 54.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 52.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 46.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 46.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 46.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 46.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 44.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 43.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 41.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 40.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 40.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 40.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 40.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 39.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 39.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 38.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 38.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 37.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 37.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 37.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 37.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 37.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 36.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 36.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 36.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 36.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 36.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 35.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 35.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 34.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 34.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 34.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 34.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 33.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 33.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 33.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 33.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 32.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 32.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 32.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 31.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 31.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 31.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 31.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 31.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 31.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 30.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 30.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 30.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 30.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 30.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 30.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 29.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 29.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 29.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 29.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 29.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 29.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 29.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 29.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 29.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 29.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 29.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 28.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 28.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 28.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 28.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 28.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 28.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 28.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 28.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 28.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 28.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 28.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 28.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 28.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 28.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 28.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 27.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 27.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 27.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 27.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 27.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 27.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 27.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 26.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 26.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 26.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 26.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 26.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 26.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 26.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 26.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 26.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 26.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 26.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 26.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 26.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 26.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 26.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 25.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 25.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 25.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 25.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 25.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 25.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 25.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 25.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 25.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 25.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 25.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 25.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 25.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 25.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 25.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 25.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 25.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 25.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 24.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 24.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 24.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 24.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 24.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 24.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 24.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 24.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 24.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 24.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 23.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 23.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 23.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 23.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 23.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 23.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 23.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 23.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 23.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 23.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 23.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 22.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 22.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 22.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 22.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 22.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 21.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 21.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 21.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 21.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 21.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 21.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 21.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 21.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 21.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 21.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 21.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 21.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 21.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 21.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 21.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 20.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 20.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 20.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 20.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 20.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 20.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 20.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 20.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 20.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 20.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 20.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 20.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 20.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 20.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 20.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 20.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 19.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 19.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 19.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 19.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 19.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 19.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 19.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 19.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 19.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 19.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 18.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 18.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 18.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 18.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 18.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 18.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 18.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 18.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 18.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 18.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 18.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 18.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 17.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 17.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 17.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 17.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 17.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 17.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 17.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 17.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 17.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 16.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 16.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 16.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 16.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 16.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 16.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 16.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 16.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 16.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 15.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 15.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 15.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 15.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 15.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 15.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 14.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 14.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 14.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 14.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 14.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 12.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 12.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 12.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 10.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 10.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 10.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 9.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.6
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Brain - Putamen (basal ganglia)
Average nTPM: 38.3
Samples: 205

Max nTPM: 111.3
Min nTPM: 18.4
Std nTPM: 13.3
Median nTPM: 36.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 111.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 109.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 88.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 82.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 82.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 72.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 68.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 65.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 63.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 61.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 59.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 57.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 55.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 54.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 53.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 52.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 52.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 52.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 50.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 50.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 49.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 48.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 48.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 48.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 47.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 47.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 47.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 47.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 47.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 47.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 46.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 46.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 46.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 46.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 46.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 45.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 45.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 44.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 44.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 44.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 44.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 44.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 43.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 43.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 43.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 43.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 43.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 43.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 43.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 43.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 42.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 42.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 42.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 42.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 42.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 41.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 41.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 41.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 41.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 41.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 41.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 41.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 41.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 40.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 40.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 40.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 39.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 39.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 39.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 39.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 38.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 38.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 38.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 38.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 38.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 38.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 38.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 38.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 38.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 38.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 38.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 38.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 38.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 37.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 37.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 37.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 37.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 36.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 36.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 36.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 36.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 36.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 36.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 36.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 36.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 35.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 35.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 35.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 35.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 35.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 35.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 35.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 35.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 34.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 34.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 34.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 34.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 33.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 33.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 33.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 33.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 33.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 33.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 33.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 33.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 33.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 33.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 33.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 33.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 32.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 32.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 32.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 32.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 32.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 32.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 32.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 31.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 31.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 31.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 31.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 31.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 31.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 30.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 30.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 30.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 30.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 29.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 29.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 29.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 28.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 28.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 28.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 28.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 28.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 28.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 28.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 28.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 28.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 27.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 27.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 27.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 27.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 27.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 27.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 27.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 26.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 26.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 26.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 26.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 26.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 26.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 26.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 25.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 25.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 25.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 25.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 25.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 24.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 24.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 23.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 23.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 23.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 23.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 23.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 22.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 22.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 22.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 21.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 21.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 21.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 21.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 20.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 19.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 18.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 67.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 35.8
FF:10164-103B2 76 years, female 35.8
Globus pallidus
Scaled Tags Per Million: 62.8
FF:10161-103A8 76 years, female 75.1
FF:10175-103C4 60 years, female 50.5
Nucleus accumbens
Scaled Tags Per Million: 67.9
FF:10037-101F1 23-56 years, mixed 67.9
Putamen
Scaled Tags Per Million: 47.0
FF:10176-103C5 60 years, female 47.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 53.7
Pig sample Sample description nTPM
Caudate
nTPM: 51.9
Samples: 4

Max nTPM: 62.4
Min nTPM: 41.7
Sample A Female 41.7
Sample B Female 50.7
Sample C Male 62.4
Sample D Male 52.8
Putamen
nTPM: 53.7
Samples: 4

Max nTPM: 69.7
Min nTPM: 41.3
Sample A Female 41.3
Sample B Female 45.6
Sample C Male 69.7
Sample D Male 58.3
Septum
nTPM: 45.6
Samples: 4

Max nTPM: 57.9
Min nTPM: 40.0
Sample A Female 42.2
Sample B Female 42.4
Sample C Male 57.9
Sample D Male 40.0
Ventral pallidum
nTPM: 51.9
Samples: 4

Max nTPM: 65.0
Min nTPM: 43.7
Sample A Female 48.3
Sample B Female 43.7
Sample C Male 65.0
Sample D Male 50.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 76.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 76.2
Samples: 4

Max nTPM: 80.8
Min nTPM: 71.1
Sample A Male 79.9
Sample B Male 80.8
Sample C Female 71.1
Sample D Female 72.8
Septum
nTPM: 51.7
Samples: 4

Max nTPM: 60.7
Min nTPM: 45.1
Sample A Male 60.7
Sample B Male 45.1
Sample C Female 48.2
Sample D Female 52.6
Ventral forebrain
nTPM: 61.4
Samples: 4

Max nTPM: 65.0
Min nTPM: 57.0
Sample A Male 61.6
Sample B Male 65.0
Sample C Female 57.0
Sample D Female 61.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.9
70436746 Antisense, RP_050316_01_A03, Mouse strain C57BL/6J (56 days, male) 5.9
69028282 Antisense, RP_050316_01_A03, Mouse strain C57BL/6J (56 days, male) 5.7
Pallidum
Expression energy: 5.5
70436746 Antisense, RP_050316_01_A03, Mouse strain C57BL/6J (56 days, male) 5.5
69028282 Antisense, RP_050316_01_A03, Mouse strain C57BL/6J (56 days, male) 4.4

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