COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.9 nTPM
HPA:13.2 nTPM
GTEx:15.9 nTPM
FANTOM5:3.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB019402
Endothelial cells Low
Glandular cells High
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 13.2
overview
Male, age 54 		Colon sample 67
nTPM: 14.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 14.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 11.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 10
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 11
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 15.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 12.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 19
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 14.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 15.9
Samples: 373

Max nTPM: 28.6
Min nTPM: 8.2
Std nTPM: 2.8
Median nTPM: 15.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 28.6
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 27.4
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 26.6
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 24.7
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 24.1
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 23.6
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 23.2
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 22.9
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 22.8
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 22.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 22.5
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Colon - Transverse
Average nTPM: 11.8
Samples: 406

Max nTPM: 22.5
Min nTPM: 6.4
Std nTPM: 3.1
Median nTPM: 11.1
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 22.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 21.3
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 20.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 19.9
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 19.8
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 19.8
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 19.6
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 19.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 19.4
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 19.3
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 19.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 3.2
FF:10014-101C5 62,83,84 years, mixed 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.