HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:29.6 nTPM
HPA:29.6 nTPM
GTEx:21.1 nTPM
FANTOM5:9.2 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:46.9 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB019402
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1855 Male, age 76, left hemisphere 28.4
2148 Female, age 91, left hemisphere 27.8
1898 Male, age 80, left hemisphere 27.7
1911 Female, age 85, right hemisphere 25.7
2621 Female, age 67, right hemisphere 24.7
2529 Female, age 94, left hemisphere 22.6
Dentate gyrus
nTPM: 24.7
1927 Female, age 91, both hemispheres 32.3
2246 Female, age 85, both hemispheres 28.4
2010 Male, age 76, both hemispheres 25.0
2531 Female, age 67, both hemispheres 24.4
2528 Male, age 74, both hemispheres 21.5
2530 Female, age 94, left hemisphere 16.7
Entorhinal gyrus
nTPM: 20.9
1938 Female, age 85, left hemisphere 26.6
1787 Male, age 76, left hemisphere 21.2
2764 Male, age 80, right hemisphere 21.0
2117 Female, age 91, right hemisphere 19.6
2613 Female, age 94, left hemisphere 18.6
2686 Male, age 75, right hemisphere 18.4
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 42.4
1873 Female, age 85, both hemispheres 31.5
2045 Male, age 76, both hemispheres 28.9
2527 Male, age 74, both hemispheres 26.7
2082 Female, age 91, right hemisphere 18.4
Hippocampus, CA2
nTPM: 21.4
1963 Male, age 80, left hemisphere 26.3
1892 Male, age 76, both hemispheres 25.2
2113 Female, age 91, right hemisphere 20.3
2249 Male, age 74, both hemispheres 20.1
2437 Female, age 94, left hemisphere 19.1
1940 Female, age 85, left hemisphere 17.1
Hippocampus, CA3
nTPM: 27.2
2137 Male, age 80, left hemisphere 38.9
2620 Female, age 94, left hemisphere 29.5
1891 Female, age 85, both hemispheres 24.9
2861 Female, age 67, both hemispheres 24.2
2436 Male, age 74, both hemispheres 23.2
1867 Male, age 76, both hemispheres 22.6
Parahippocampal cortex
nTPM: 21.8
1850 Male, age 80, both hemispheres 25.7
2245 Female, age 91, both hemispheres 24.3
1933 Female, age 85, both hemispheres 23.5
2250 Female, age 67, right hemisphere 22.7
2692 Male, age 74, both hemispheres 21.9
2622 Female, age 67, right hemisphere 21.8
2693 Female, age 94, both hemispheres 21.1
2532 Female, age 72, left hemisphere 19.9
1990 Female, age 91, right hemisphere 19.8
2018 Male, age 76, both hemispheres 17.1
Perirhinal gyrus
nTPM: 25.1
1847 Female, age 91, left hemisphere 27.6
1841 Female, age 85, right hemisphere 25.3
1794 Male, age 80, right hemisphere 25.2
2521 Female, age 94, right hemisphere 25.1
2848 Male, age 76, right hemisphere 22.1
Subiculum
nTPM: 22.8
2438 Female, age 94, left hemisphere 26.2
1901 Male, age 80, both hemispheres 24.7
2619 Male, age 74, both hemispheres 23.5
1977 Female, age 85, both hemispheres 23.3
2729 Female, age 91, right hemisphere 20.4
2042 Male, age 76, both hemispheres 18.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.1
Samples: 197

Max nTPM: 35.9
Min nTPM: 13.1
Std nTPM: 4.1
Median nTPM: 20.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 35.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 31.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 31.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 31.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 30.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 30.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 30.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 29.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 29.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 29.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 28.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.2
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 5.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.0
Samples: 4

Max nTPM: 38.3
Min nTPM: 31.7
Sample A Female 38.1
Sample B Female 38.3
Sample C Male 31.7
Sample D Male 32.0
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 39.1
Min nTPM: 29.5
Sample A Female 39.1
Sample B Female 30.2
Sample C Male 34.7
Sample D Male 29.5
Subiculum
nTPM: 33.9
Samples: 4

Max nTPM: 39.1
Min nTPM: 30.1
Sample A Female 39.1
Sample B Female 32.6
Sample C Male 33.6
Sample D Male 30.1
Ventral hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 39.9
Min nTPM: 28.8
Sample A Female 35.7
Sample B Female 28.8
Sample C Male 37.4
Sample D Male 39.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 50.9
Min nTPM: 37.2
Sample A Male 44.7
Sample B Male 37.2
Sample C Female 39.2
Sample D Female 50.9
Hippocampal formation
nTPM: 47.0
Samples: 4

Max nTPM: 59.3
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 52.0
Sample C Female 59.3
Sample D Female 39.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
69289471 Antisense, RP_050407_03_C08, Mouse strain C57BL/6J (56 days, male) 7.4

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