HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:9.2 nTPM
HPA:9.2 nTPM
GTEx:8.6 nTPM
FANTOM5:33.1 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:24.8 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050603
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.2
Sample id Sample description nTPM
Hippocampus
nTPM: 7.5
2529 Female, age 94, left hemisphere 9.7
1898 Male, age 80, left hemisphere 7.7
2148 Female, age 91, left hemisphere 7.2
1911 Female, age 85, right hemisphere 7.0
1855 Male, age 76, left hemisphere 6.8
2621 Female, age 67, right hemisphere 6.8
Dentate gyrus
nTPM: 8.0
2010 Male, age 76, both hemispheres 8.5
2530 Female, age 94, left hemisphere 8.5
2531 Female, age 67, both hemispheres 8.3
1927 Female, age 91, both hemispheres 7.7
2528 Male, age 74, both hemispheres 7.7
2246 Female, age 85, both hemispheres 7.5
Entorhinal gyrus
nTPM: 8.3
2764 Male, age 80, right hemisphere 9.1
2117 Female, age 91, right hemisphere 8.8
1938 Female, age 85, left hemisphere 8.7
1787 Male, age 76, left hemisphere 8.6
2613 Female, age 94, left hemisphere 8.4
2686 Male, age 75, right hemisphere 6.4
Hippocampus, CA1
nTPM: 7.7
2045 Male, age 76, both hemispheres 8.7
2527 Male, age 74, both hemispheres 8.5
2082 Female, age 91, right hemisphere 7.2
2749 Male, age 80, left hemisphere 7.0
1873 Female, age 85, both hemispheres 6.9
Hippocampus, CA2
nTPM: 7.7
1892 Male, age 76, both hemispheres 7.9
1940 Female, age 85, left hemisphere 7.9
2249 Male, age 74, both hemispheres 7.8
1963 Male, age 80, left hemisphere 7.7
2437 Female, age 94, left hemisphere 7.7
2113 Female, age 91, right hemisphere 7.4
Hippocampus, CA3
nTPM: 7.7
1867 Male, age 76, both hemispheres 8.4
1891 Female, age 85, both hemispheres 8.0
2436 Male, age 74, both hemispheres 7.7
2620 Female, age 94, left hemisphere 7.6
2861 Female, age 67, both hemispheres 7.4
2137 Male, age 80, left hemisphere 7.2
Parahippocampal cortex
nTPM: 8.5
1850 Male, age 80, both hemispheres 10.2
2018 Male, age 76, both hemispheres 9.2
2532 Female, age 72, left hemisphere 8.8
1990 Female, age 91, right hemisphere 8.6
2245 Female, age 91, both hemispheres 8.5
1933 Female, age 85, both hemispheres 8.3
2250 Female, age 67, right hemisphere 8.2
2693 Female, age 94, both hemispheres 8.2
2692 Male, age 74, both hemispheres 8.1
2622 Female, age 67, right hemisphere 6.5
Perirhinal gyrus
nTPM: 9.2
1794 Male, age 80, right hemisphere 9.7
1841 Female, age 85, right hemisphere 9.7
1847 Female, age 91, left hemisphere 9.3
2521 Female, age 94, right hemisphere 8.9
2848 Male, age 76, right hemisphere 8.6
Subiculum
nTPM: 8.3
2438 Female, age 94, left hemisphere 8.7
1901 Male, age 80, both hemispheres 8.5
2042 Male, age 76, both hemispheres 8.4
1977 Female, age 85, both hemispheres 8.3
2729 Female, age 91, right hemisphere 7.9
2619 Male, age 74, both hemispheres 7.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.6
Samples: 197

Max nTPM: 17.1
Min nTPM: 4.6
Std nTPM: 2.0
Median nTPM: 8.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 17.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 13.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 13.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 12.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 12.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 12.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.1
FF:10153-102I9 76 years, female 38.1
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.1
Sample A Female 23.2
Sample B Female 18.7
Sample C Male 21.5
Sample D Male 17.1
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 21.7
Min nTPM: 19.1
Sample A Female 21.1
Sample B Female 21.7
Sample C Male 19.7
Sample D Male 19.1
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 24.7
Min nTPM: 16.6
Sample A Female 24.7
Sample B Female 17.3
Sample C Male 16.7
Sample D Male 16.6
Ventral hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 20.2
Min nTPM: 16.0
Sample A Female 17.7
Sample B Female 16.0
Sample C Male 20.2
Sample D Male 17.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 23.8
Sample A Male 23.8
Sample B Male 23.8
Sample C Female 25.1
Sample D Female 26.5
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 23.7
Min nTPM: 22.8
Sample A Male 23.7
Sample B Male 22.8
Sample C Female 23.1
Sample D Female 23.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
71992085 Antisense, RP_051012_04_B05, Mouse strain C57BL/6J (56 days, male) 2.0
71609045 Antisense, RP_050712_01_D05, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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