DGUOK

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:13.4 FPKM
GTEx:21.7 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Not detected
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA034766

 

Antibody HPA057246

 

Fibroblasts

Medium   Low  

Keratinocytes

Not detected   Not detected  

Langerhans

High   Medium  

Melanocytes

Not detected   Medium  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 
 

Antibody staining

Antibody HPA034766

 

Antibody HPA057246

 

Epidermal cells

Low   Low  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

13.4

overview Female, age 34
Sample 1
FPKM: 15.4
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 13.9
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 10.9

SKIN - GTEx RNA-seq

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Average RPKM

21.7

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 21.5
Samples: 250

Max RPKM: 30.5
Min RPKM: 13
Std RPKM: 3.2
Median RPKM: 21.4
GTEX-ZYW4-0626-SM-59HJR 30.5
GTEX-14C38-0726-SM-5SI6M 30.3
GTEX-145MG-1526-SM-5Q5EM 30.2
GTEX-11WQK-1026-SM-5EQLX 29.1
GTEX-148VJ-0626-SM-5LUAW 29.0
GTEX-1399Q-2326-SM-5KM2X 28.9
GTEX-13NYB-0126-SM-5J1MD 28.8
GTEX-131XH-0126-SM-5LZUY 28.5
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 21.8
Samples: 357

Max RPKM: 42.6
Min RPKM: 14.1
Std RPKM: 3.2
Median RPKM: 21.5
GTEX-13PVQ-0126-SM-5SIB4 42.6
GTEX-131XE-2326-SM-5PNZ2 37.0
GTEX-13IVO-0126-SM-5J1NG 32.0
GTEX-13PDP-0126-SM-5L3HD 31.3
GTEX-O5YT-0126-SM-48TBW 30.7
GTEX-14753-0426-SM-5NQAM 30.0
GTEX-145LS-0126-SM-5QGP1 29.7
GTEX-14E6E-1826-SM-5S2R7 28.8
Show all