HMGN5

GENERAL INFORMATION

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Gene name

HMGN5

Gene description

High mobility group nucleosome binding domain 5

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

6
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein localization

Most normal tissues showed moderate to strong nuclear positivity. A subset of cells in lymphoid organs showed nuclear positivity. Cells in CNS were generally negative.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 1 antibody.
HPA000511
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enriched (testis)

Organ

Expression



GENE INFORMATION

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Gene name

HMGN5 (HGNC Symbol)

Synonyms

NSBP1

Description

High mobility group nucleosome binding domain 5 (HGNC Symbol)

Entrez gene summary

This gene encodes a nuclear protein with similarities to the high mobility group proteins, HMG14 and HMG17, which suggests that this protein may function as a nucleosomal binding and transcriptional activating protein. [provided by RefSeq, Sep 2009]

Chromosome

X

Cytoband

q21.1

Chromosome location (bp)

81113701 - 81201942

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000198157 (version 78.38)

Entrez gene

79366

UniProt

P82970 (UniProt - Evidence at protein level)

neXtProt

NX_P82970

Antibodypedia

HMGN5 antibodies


PROTEIN BROWSER

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ENST00000358130
 
ENST00000373250
 
ENST00000430960
 
ENST00000436386
 
ENST00000447319
 
ENST00000451455
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

HMGN5-001 ENSP00000350848
ENST00000358130
P82970
Show all »
Show » Show » 282 31.5 No 0
HMGN5-002 ENSP00000413402
ENST00000436386
Q5JSK8
Show all »
Show » Show » 102 11.4 No 0
HMGN5-003 ENSP00000404810
ENST00000451455
Q5JSK7
Show all »
Show » Show » 89 10 No 0
HMGN5-004 ENSP00000408060
ENST00000447319
Q5JSK9
Show all »
Show » Show » 201 22.4 No 0
HMGN5-006 ENSP00000399626
ENST00000430960
Q5JSL0
Show all »
Show » Show » 148 16.5 No 0
HMGN5-007 ENSP00000362347
ENST00000373250
Q5JSK6
Show all »
Show » Show » 161 18 No 0