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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1463.6 nTPM
HPA Brain:2155.8 nTPM
GTEx:1463.6 nTPM
Pig:2196.5 nTPM
Mouse:690.8 nTPM
Allen mouse:24.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2155.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1599.0
2226 Male, age 75, left hemisphere 1814.6
1961 Female, age 42, unknown 1383.5
Dorsomedial nucleus
nTPM: 1396.2
1989 Male, age 62, unknown 1571.8
2017 Female, age 42, unknown 1420.5
2041 Female, age 72, unknown 1196.2
Lateral hypothalamic area
nTPM: 2155.8
2271 Male, age 75, both hemispheres 2703.1
2228 Male, age 66, unknown 2499.8
1791 Male, age 80, right hemisphere 2149.6
2412 Male, age 62, unknown 1270.8
Mammillary body
nTPM: 1901.3
1834 Female, age 42, unknown 1972.8
2413 Male, age 66, unknown 1965.2
1923 Female, age 72, unknown 1934.2
1945 Male, age 80, right hemisphere 1829.0
1948 Female, age 72, unknown 1805.5
Paraventricular nucleus
nTPM: 1632.4
2700 Male, age 62, unknown 1632.4
Preoptic area
nTPM: 1526.5
2414 Female, age 72, unknown 1712.5
1861 Female, age 42, unknown 1464.5
1907 Male, age 80, right hemisphere 1402.6
Supraoptic nucleus
nTPM: 1909.1
2043 Male, age 62, unknown 2119.1
1894 Female, age 72, unknown 1915.5
2835 Female, age 72, unknown 1692.7
Ventromedial nucleus
nTPM: 1433.3
1982 Female, age 72, unknown 1556.1
1822 Female, age 42, unknown 1310.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1463.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1463.6
Samples: 257

Max nTPM: 4527.4
Min nTPM: 719.6
Std nTPM: 494.0
Median nTPM: 1357.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 4527.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 4239.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 3938.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 2794.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 2688.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 2590.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 2490.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 2375.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2332.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 2304.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 2274.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 2258.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 2244.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 2192.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 2185.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2181.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2128.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 2127.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 2124.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 2085.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 2080.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2080.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2067.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 2057.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 2033.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 2012.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 2005.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 2000.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1974.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1970.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1969.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1953.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 1926.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1919.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1913.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1907.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1899.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1898.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1888.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 1876.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1865.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1856.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 1843.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1843.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1837.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1800.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1800.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1786.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1780.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 1775.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1772.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1763.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1754.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1753.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1752.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1750.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1749.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1743.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1736.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1721.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 1720.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1718.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1698.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1693.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1693.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1690.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1681.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1672.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1670.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1668.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1665.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1658.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1649.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1638.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1630.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1625.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 1606.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1602.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1593.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1587.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1582.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1577.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1566.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 1562.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1562.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1557.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1554.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1542.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1536.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1535.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1531.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1516.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1510.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1507.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1505.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 1504.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1502.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1498.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1491.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 1488.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 1472.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1463.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1461.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 1448.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1447.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1445.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1443.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1438.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 1435.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1433.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 1428.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1426.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1425.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 1423.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 1422.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1421.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1421.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1414.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 1403.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1394.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1388.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 1382.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1374.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 1369.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1369.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 1366.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 1363.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1363.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 1357.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1355.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 1352.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1347.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1347.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1346.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1342.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1339.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1338.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1337.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1337.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 1333.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1330.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 1327.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1323.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1322.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 1322.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1320.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 1319.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 1319.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1318.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1318.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1315.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 1314.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 1312.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1308.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1305.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1296.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1294.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 1288.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1287.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1286.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1282.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 1281.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1278.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1277.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1270.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 1258.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1255.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 1250.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 1246.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 1244.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 1240.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 1239.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1235.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1232.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1230.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 1228.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 1226.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 1219.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1209.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1202.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1202.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1201.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 1187.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1179.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 1176.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1172.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 1169.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 1169.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1164.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1158.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 1152.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 1151.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1145.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 1132.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1121.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1120.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1115.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1115.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 1114.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 1113.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1106.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 1100.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1096.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1080.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1079.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 1078.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1074.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 1068.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1065.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1063.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 1063.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 1056.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 1056.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 1052.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 1047.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 1038.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1036.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 1032.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 1032.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 1030.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1030.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 1025.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1016.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1008.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 1006.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1003.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1001.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 996.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 994.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 993.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 989.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 977.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 973.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 968.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 957.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 956.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 940.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 934.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 916.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 914.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 907.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 907.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 903.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 902.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 887.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 882.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 878.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 856.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 842.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 835.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 828.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 821.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 809.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 790.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 766.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 752.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 719.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2196.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2196.5
Samples: 4

Max nTPM: 2967.3
Min nTPM: 1538.5
Sample A Female 2967.3
Sample B Female 2139.4
Sample C Male 2140.8
Sample D Male 1538.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

690.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 690.8
Samples: 4

Max nTPM: 712.1
Min nTPM: 643.0
Sample A Male 708.8
Sample B Male 712.1
Sample C Female 643.0
Sample D Female 699.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.4
74881516 Antisense, RP_060315_04_C04, Mouse strain C57BL/6J (56 days, male) 26.7
81600126 Antisense, RP_080306_03_B07, Mouse strain C57BL/6J (56 days, male) 25.7
69514684 Antisense, RP_050419_03_H03, Mouse strain C57BL/6J (56 days, male) 20.7

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