ATRX

CEREBRAL CORTEX - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:20.9 FPKM
GTEx:5.5 RPKM

CEREBRAL CORTEX - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glial cells:High
Neuronal cells:Medium
Neuropil:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001906

 

Antibody CAB009372

 

Antibody CAB068176

 

Endothelial cells

High   Not detected   Not detected  

Glial cells

High   High   Not detected  

Neuronal cells

High   High   Medium  

Neuropil

Not detected   Low   High  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

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Average FPKM

20.9

N/A Male, age 5
Sample 1
FPKM: 23.5
overview Female, age 40
Sample 2
FPKM: 18.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
FPKM: 20.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

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Average RPKM

5.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 5.1
Samples: 114

Max RPKM: 9.3
Min RPKM: 3.5
Std RPKM: 1
Median RPKM: 5
GTEX-11OF3-2926-SM-5HL78 9.3
GTEX-QMR6-1426-SM-32PLA 8.6
GTEX-PVOW-2526-SM-2XCF7 8.0
GTEX-UTHO-3026-SM-3GAFB 7.8
GTEX-WZTO-2926-SM-3NM9I 7.2
GTEX-X4XX-3026-SM-3NMB2 6.8
GTEX-QVJO-1426-SM-2S1QY 6.8
GTEX-13NYC-2826-SM-5K7WR 6.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 6.0
Samples: 108

Max RPKM: 11.1
Min RPKM: 2.6
Std RPKM: 1.5
Median RPKM: 5.8
GTEX-QDT8-0011-R10A-SM-32PKG 11.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 10.4
GTEX-WVLH-0011-R10A-SM-3MJFM 9.0
GTEX-12WSE-0011-R10b-SM-5P9JV 8.9
GTEX-QMR6-0011-R10A-SM-32PKO 8.8
GTEX-WWYW-0011-R10A-SM-3NB35 8.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 8.4
GTEX-X4XX-0011-R10B-SM-46MWO 8.2
Show all