HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:88.1 nTPM
HPA:88.1 nTPM
GTEx:75.0 nTPM
FANTOM5:252.1 Scaled Tags Per Million
Pig:132.9 nTPM
Mouse:313.1 nTPM
Allen mouse:16.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029159Antibody HPA029160Antibody CAB000108Antibody CAB001950
Glial cells LowNot detectedLowLow
Neuronal cells MediumNot detectedLowNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.1
Sample id Sample description nTPM
Hippocampus
nTPM: 86.7
1898 Male, age 80, left hemisphere 94.4
2529 Female, age 94, left hemisphere 91.3
2621 Female, age 67, right hemisphere 90.7
1855 Male, age 76, left hemisphere 84.3
1911 Female, age 85, right hemisphere 84.3
2148 Female, age 91, left hemisphere 74.9
Dentate gyrus
nTPM: 85.4
2528 Male, age 74, both hemispheres 99.5
2010 Male, age 76, both hemispheres 92.3
2246 Female, age 85, both hemispheres 83.7
1927 Female, age 91, both hemispheres 83.5
2530 Female, age 94, left hemisphere 79.5
2531 Female, age 67, both hemispheres 74.0
Entorhinal gyrus
nTPM: 76.4
1938 Female, age 85, left hemisphere 97.2
1787 Male, age 76, left hemisphere 79.9
2117 Female, age 91, right hemisphere 77.0
2764 Male, age 80, right hemisphere 72.4
2613 Female, age 94, left hemisphere 70.4
2686 Male, age 75, right hemisphere 61.6
Hippocampus, CA1
nTPM: 88.1
2749 Male, age 80, left hemisphere 119.8
1873 Female, age 85, both hemispheres 94.4
2527 Male, age 74, both hemispheres 86.3
2082 Female, age 91, right hemisphere 70.9
2045 Male, age 76, both hemispheres 69.1
Hippocampus, CA2
nTPM: 84.0
2249 Male, age 74, both hemispheres 101.6
1963 Male, age 80, left hemisphere 94.7
1892 Male, age 76, both hemispheres 82.6
2437 Female, age 94, left hemisphere 77.9
2113 Female, age 91, right hemisphere 73.8
1940 Female, age 85, left hemisphere 73.6
Hippocampus, CA3
nTPM: 84.5
2137 Male, age 80, left hemisphere 99.8
2436 Male, age 74, both hemispheres 90.8
1867 Male, age 76, both hemispheres 88.6
2861 Female, age 67, both hemispheres 78.5
1891 Female, age 85, both hemispheres 77.6
2620 Female, age 94, left hemisphere 72.0
Parahippocampal cortex
nTPM: 71.7
1933 Female, age 85, both hemispheres 85.7
1850 Male, age 80, both hemispheres 81.1
2250 Female, age 67, right hemisphere 76.4
1990 Female, age 91, right hemisphere 74.0
2532 Female, age 72, left hemisphere 73.7
2245 Female, age 91, both hemispheres 71.6
2018 Male, age 76, both hemispheres 67.1
2693 Female, age 94, both hemispheres 65.5
2692 Male, age 74, both hemispheres 64.9
2622 Female, age 67, right hemisphere 56.9
Perirhinal gyrus
nTPM: 86.6
1847 Female, age 91, left hemisphere 101.2
1841 Female, age 85, right hemisphere 93.5
1794 Male, age 80, right hemisphere 84.9
2521 Female, age 94, right hemisphere 81.3
2848 Male, age 76, right hemisphere 72.2
Subiculum
nTPM: 77.3
1977 Female, age 85, both hemispheres 83.0
1901 Male, age 80, both hemispheres 80.2
2438 Female, age 94, left hemisphere 79.0
2729 Female, age 91, right hemisphere 77.9
2042 Male, age 76, both hemispheres 75.2
2619 Male, age 74, both hemispheres 68.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.0
Samples: 197

Max nTPM: 116.3
Min nTPM: 48.5
Std nTPM: 11.5
Median nTPM: 74.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 116.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 99.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 99.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 98.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 98.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 97.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 97.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 96.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 95.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 93.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 93.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 252.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 252.1
FF:10169-103B7 60 years, female 299.2
FF:10153-102I9 76 years, female 205.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 132.9
Samples: 4

Max nTPM: 177.6
Min nTPM: 103.4
Sample A Female 177.6
Sample B Female 128.6
Sample C Male 122.0
Sample D Male 103.4
Entorhinal cortex
nTPM: 103.4
Samples: 4

Max nTPM: 116.2
Min nTPM: 80.1
Sample A Female 104.1
Sample B Female 116.2
Sample C Male 113.3
Sample D Male 80.1
Subiculum
nTPM: 124.4
Samples: 4

Max nTPM: 157.0
Min nTPM: 106.4
Sample A Female 157.0
Sample B Female 122.3
Sample C Male 111.9
Sample D Male 106.4
Ventral hippocampus
nTPM: 117.0
Samples: 4

Max nTPM: 123.2
Min nTPM: 102.7
Sample A Female 123.2
Sample B Female 102.7
Sample C Male 122.6
Sample D Male 119.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 313.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 313.1
Samples: 4

Max nTPM: 358.3
Min nTPM: 276.8
Sample A Male 288.0
Sample B Male 276.8
Sample C Female 329.3
Sample D Female 358.3
Hippocampal formation
nTPM: 294.2
Samples: 4

Max nTPM: 301.4
Min nTPM: 286.3
Sample A Male 301.4
Sample B Male 286.3
Sample C Female 290.4
Sample D Female 298.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.2
79591729 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 19.9
79904258 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 12.8
197 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 12.4
196 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 8.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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