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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:109.3 nTPM
GTEx:109.3 nTPM
FANTOM5:348.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029159Antibody HPA029160Antibody CAB000108Antibody CAB001950
Squamous epithelial cells HighHighLowNot detected







VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 109.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 109.3
Samples: 156

Max nTPM: 167.2
Min nTPM: 70.7
Std nTPM: 20.3
Median nTPM: 109.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 167.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 166.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 163.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 160.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 152.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 150.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 148.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 146.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 143.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 142.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 141.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 138.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 138.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 137.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 136.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 136.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 135.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 134.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 134.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 134.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 132.6
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 132.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 131.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 130.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 129.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 129.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 128.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 128.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 126.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 126.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 125.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 124.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 124.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 123.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 123.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 123.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 122.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 122.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 122.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 122.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 122.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 121.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 120.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 120.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 120.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 119.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 119.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 118.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 118.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 118.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 117.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 117.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 116.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 115.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 115.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 114.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 114.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 113.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 112.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 112.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 112.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 112.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 112.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 111.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 111.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 111.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 111.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 111.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 111.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 110.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 110.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 110.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 109.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 109.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 109.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 109.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 109.1
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 109.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 108.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 108.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 108.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 106.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 106.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 106.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 105.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 105.5
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 105.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 105.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 104.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 104.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 104.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 104.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 103.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 103.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 103.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 103.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 103.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 102.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 102.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 102.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 101.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 101.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 100.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 100.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 100.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 100.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 99.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 99.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 97.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 97.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 97.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 96.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 96.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 95.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 95.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 95.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 95.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 94.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 94.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 93.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 93.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 92.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 92.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 91.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 91.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 90.9
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 90.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 89.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 88.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 88.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 87.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 87.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 86.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 85.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 84.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 84.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 84.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 84.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 84.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 83.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 83.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 82.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 82.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 81.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 81.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 79.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 78.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 78.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 78.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 77.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 75.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 75.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 75.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 74.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 72.7
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 70.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 348.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 348.1
FF:10204-103F6 68 years, female 348.1

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The Human Protein Atlas project is funded
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