We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CTNNB1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • CTNNB1
TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Cells in glomeruli: Low
Cells in tubules: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:106.5 nTPM
HPA:106.5 nTPM
GTEx:70.3 nTPM
FANTOM5:290.9 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029159Antibody HPA029160Antibody CAB000108Antibody CAB001950
Cells in glomeruli MediumLowMediumNot detected
Cells in tubules HighHighMediumLow









KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 106.5
overview
Female, age 58
Kidney sample 55
nTPM: 93.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 98
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 83.3
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 98.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 121.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 109.1
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 101.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 126.6
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 126.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 70.3
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 64.7
Samples: 85

Max nTPM: 83.8
Min nTPM: 46.0
Std nTPM: 9.6
Median nTPM: 64.6
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 83.8
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 82.5
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 81.9
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 80.8
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 80.5
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 80.2
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 78.5
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 77.4
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 76.8
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 76.0
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 76.0
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 75.9
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 75.4
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 75.4
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 74.8
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 74.8
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 74.5
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 74.2
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 74.0
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 73.2
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 72.8
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 72.6
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 71.6
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 71.3
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 71.2
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 70.1
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 69.8
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 69.7
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 69.4
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 69.2
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 69.2
GTEX-14C39-2126-SM-664OH 40-49 years, male 69.1
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 67.7
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 67.5
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 67.3
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 67.1
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 66.5
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 66.4
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 66.2
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 65.7
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 65.4
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 65.0
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 64.6
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 64.5
GTEX-RN64-1626-SM-48FD7 50-59 years, male 63.6
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 63.4
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 63.0
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 62.8
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 62.8
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 62.6
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 62.6
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 62.4
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 62.2
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 61.8
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 61.7
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 61.7
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 61.7
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 61.5
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 60.6
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 60.4
GTEX-12696-0926-SM-5FQTV 60-69 years, male 59.3
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 59.2
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 59.0
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 57.6
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 57.3
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 57.3
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 56.7
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 56.0
GTEX-13112-2126-SM-5GCO4 50-59 years, male 55.2
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 54.0
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 54.0
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 53.3
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 52.4
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 52.2
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 51.9
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 51.4
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 51.0
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 49.4
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 48.8
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 48.2
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 47.5
GTEX-O5YV-1226-SM-EV795 60-69 years, female 47.5
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 47.4
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 46.7
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 46.0
Show allShow less
Kidney - Medulla
Average nTPM: 70.3
Samples: 4

Max nTPM: 83.5
Min nTPM: 55.8
Std nTPM: 11.3
Median nTPM: 71.0
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 83.5
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 79.2
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 62.9
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 55.8

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 290.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 290.9
FF:10017-101C8 60,62,63 years, female 290.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.