PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:101.3 nTPM
HPA:101.3 nTPM
FANTOM5:282.4 Scaled Tags Per Million
Pig:159.5 nTPM
Mouse:223.2 nTPM
Allen mouse:4.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 101.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 74.2
2301 Female, age 85, both hemispheres 77.4
1984 Male, age 76, both hemispheres 75.2
2090 Male, age 80, both hemispheres 72.8
2188 Female, age 91, both hemispheres 71.4
Area postrema
nTPM: 101.3
2799 Male, age 61, both hemispheres 140.1
2306 Male, age 80, both hemispheres 86.0
2054 Male, age 76, both hemispheres 77.8
Cuneate nuclei
nTPM: 69.6
2381 Male, age 80, both hemispheres 78.1
2376 Male, age 61, both hemispheres 66.8
2131 Male, age 76, both hemispheres 63.9
Dorsal cochlear nucleus
nTPM: 81.8
2802 Male, age 74, right hemisphere 92.8
2187 Female, age 91, both hemispheres 82.4
2378 Male, age 80, both hemispheres 80.3
2370 Male, age 61, both hemispheres 77.1
2058 Male, age 76, both hemispheres 76.2
Dorsal medullary reticular nucleus
nTPM: 71.0
2040 Female, age 85, both hemispheres 77.6
2088 Male, age 76, both hemispheres 68.0
2373 Male, age 61, both hemispheres 67.3
Dorsal motor vagal complex
nTPM: 84.3
2643 Male, age 74, both hemispheres 98.1
2844 Male, age 55, unknown 95.3
2813 Female, age 72, unknown 90.2
2185 Male, age 76, both hemispheres 82.9
2000 Male, age 74, unknown 82.8
2797 Male, age 61, both hemispheres 81.5
2133 Female, age 91, both hemispheres 80.5
2807 Female, age 85, both hemispheres 63.0
Dorsal tegmental nucleus
nTPM: 82.8
2358 Male, age 61, both hemispheres 101.1
2326 Male, age 74, both hemispheres 88.2
2083 Male, age 80, both hemispheres 77.0
1936 Male, age 76, left hemisphere 65.0
Dorsolateral tegmental area
nTPM: 84.7
2360 Male, age 74, both hemispheres 108.7
2337 Male, age 61, both hemispheres 88.3
2654 Male, age 80, both hemispheres 80.3
2141 Male, age 76, both hemispheres 73.6
2751 Female, age 85, both hemispheres 72.8
Gigantocellular reticular nuclei, medullary
nTPM: 76.3
2387 Female, age 91, both hemispheres 84.7
1876 Female, age 85, both hemispheres 78.1
2462 Male, age 74, both hemispheres 77.8
2314 Male, age 61, both hemispheres 77.6
2022 Male, age 76, right hemisphere 75.7
2310 Male, age 80, both hemispheres 63.6
Gigantocellular reticular nuclei, pars
nTPM: 60.6
2084 Female, age 85, both hemispheres 68.1
2336 Male, age 61, both hemispheres 64.2
2330 Male, age 80, both hemispheres 57.5
2706 Male, age 80, both hemispheres 56.8
2168 Male, age 76, both hemispheres 56.4
Inferior olive
nTPM: 90.0
2563 Male, age 74, both hemispheres 108.2
2085 Female, age 85, both hemispheres 93.2
2379 Male, age 80, both hemispheres 88.0
2178 Male, age 61, both hemispheres 85.8
2628 Female, age 91, both hemispheres 74.9
Kolliker-Fuse nucleus
nTPM: 78.3
2315 Male, age 76, right hemisphere 92.4
2163 Male, age 80, both hemispheres 72.9
2793 Female, age 91, left hemisphere 69.8
Lateral lemniscal nuclei
nTPM: 60.5
2320 Female, age 91, left hemisphere 65.3
2453 Male, age 74, right hemisphere 61.7
2746 Female, age 85, left hemisphere 60.6
2036 Male, age 80, both hemispheres 58.2
2169 Male, age 76, both hemispheres 56.7
Lateral medullary reticular nucleus
nTPM: 85.0
2305 Male, age 74, both hemispheres 101.5
2190 Female, age 85, both hemispheres 88.8
2804 Female, age 91, both hemispheres 88.2
2852 Male, age 80, both hemispheres 84.9
2374 Male, age 61, both hemispheres 81.5
2044 Male, age 76, both hemispheres 65.3
Lateral parabrachial nucleus
nTPM: 71.7
2013 Male, age 80, both hemispheres 75.0
2792 Male, age 76, both hemispheres 75.0
2139 Female, age 85, right hemisphere 74.5
2790 Male, age 61, both hemispheres 62.3
Lateral vestibular nucleus
nTPM: 69.2
2311 Male, age 80, both hemispheres 79.1
2184 Male, age 76, both hemispheres 59.4
Locus coeruleus
nTPM: 75.2
2123 Female, age 91, both hemispheres 89.2
2014 Male, age 55, unknown 79.0
1980 Male, age 76, both hemispheres 76.9
2317 Female, age 72, unknown 74.1
2720 Male, age 74, both hemispheres 71.0
2162 Male, age 80, both hemispheres 70.1
2788 Male, age 74, unknown 65.9
Medial olivary nucleus
nTPM: 92.1
1943 Male, age 61, both hemispheres 100.4
2138 Female, age 91, both hemispheres 100.2
1962 Male, age 76, both hemispheres 91.2
2851 Male, age 80, both hemispheres 76.8
Medial parabrachial nucleus
nTPM: 75.0
2463 Female, age 85, right hemisphere 93.0
2170 Female, age 91, both hemispheres 85.1
2156 Male, age 61, both hemispheres 70.4
2786 Male, age 76, both hemispheres 63.8
2854 Male, age 80, both hemispheres 62.7
Medial periolivary nuclei
nTPM: 65.1
2791 Male, age 74, right hemisphere 77.8
2063 Male, age 76, both hemispheres 67.1
2171 Female, age 85, both hemispheres 62.9
2081 Male, age 80, both hemispheres 60.5
2458 Female, age 91, both hemispheres 57.4
Medial vestibular nucleus
nTPM: 76.2
2743 Female, age 85, both hemispheres 88.0
2801 Male, age 74, both hemispheres 83.5
2803 Female, age 91, both hemispheres 74.1
2624 Male, age 61, both hemispheres 74.0
2093 Male, age 80, both hemispheres 69.8
2134 Male, age 76, both hemispheres 68.1
Motor facial nucleus
nTPM: 67.6
2795 Female, age 91, both hemispheres 78.4
2365 Male, age 74, right hemisphere 76.1
2126 Male, age 61, both hemispheres 70.2
2062 Male, age 76, both hemispheres 67.7
2697 Female, age 85, both hemispheres 62.3
2327 Male, age 80, both hemispheres 51.0
Motor hypoglossal nucleus
nTPM: 79.3
2277 Male, age 76, both hemispheres 84.6
2125 Female, age 91, both hemispheres 82.6
2132 Female, age 85, both hemispheres 76.8
2182 Male, age 80, both hemispheres 76.6
2461 Male, age 61, both hemispheres 76.1
Motor trigeminal nucleus
nTPM: 60.7
2560 Male, age 74, both hemispheres 68.4
2335 Male, age 61, both hemispheres 67.3
2309 Male, age 76, both hemispheres 61.5
2321 Female, age 91, both hemispheres 58.0
2079 Male, age 80, both hemispheres 48.2
Nuclei of the trapezoid body
nTPM: 62.0
2368 Female, age 91, both hemispheres 70.4
1983 Male, age 76, both hemispheres 65.9
2166 Male, age 80, both hemispheres 58.7
2159 Male, age 61, both hemispheres 57.5
2735 Female, age 85, both hemispheres 57.3
Nucleus ambiguus
nTPM: 75.0
2071 Male, age 76, both hemispheres 91.5
2096 Female, age 85, both hemispheres 58.6
Nucleus cuneatus
nTPM: 79.5
2564 Male, age 74, both hemispheres 94.8
2380 Male, age 80, both hemispheres 85.2
2808 Female, age 85, both hemispheres 81.6
2562 Male, age 61, both hemispheres 77.9
2805 Female, age 91, both hemispheres 75.1
2100 Male, age 76, both hemispheres 62.6
Nucleus gracilis
nTPM: 93.9
2299 Female, age 85, both hemispheres 104.2
2627 Male, age 74, both hemispheres 100.4
2382 Male, age 80, both hemispheres 77.1
Nucleus raphe magnus
nTPM: 61.2
2455 Male, age 74, both hemispheres 70.7
2051 Male, age 76, both hemispheres 64.3
2459 Female, age 91, both hemispheres 62.6
2328 Male, age 80, both hemispheres 60.0
2160 Male, age 61, both hemispheres 54.9
2172 Female, age 85, both hemispheres 54.8
Nucleus raphe obscurus
nTPM: 79.7
2142 Male, age 76, midline 83.8
2845 Female, age 85, midline 82.8
2800 Male, age 61, midline 72.4
Nucleus raphe pallidus
nTPM: 100.9
1924 Male, age 61, midline 138.0
2145 Male, age 76, midline 84.7
2183 Male, age 80, midline 80.1
Nucleus tractus solitarii
nTPM: 77.5
2144 Female, age 91, right hemisphere 88.5
2656 Male, age 76, both hemispheres 82.1
2191 Female, age 85, both hemispheres 77.9
2307 Male, age 80, both hemispheres 61.6
Paramedian reticular nucleus
nTPM: 69.8
2057 Male, age 80, both hemispheres 76.5
2313 Male, age 61, both hemispheres 74.8
2050 Female, age 85, both hemispheres 67.4
2052 Male, age 76, both hemispheres 60.6
Parvicellular reticular nuclei
nTPM: 63.6
2119 Male, age 80, both hemispheres 74.3
2095 Male, age 76, both hemispheres 62.7
2558 Male, age 74, both hemispheres 53.9
Parvicellular reticular nuclei, medullary
nTPM: 77.3
2189 Female, age 91, both hemispheres 80.1
2181 Male, age 80, left hemisphere 76.5
2091 Female, age 85, both hemispheres 75.2
Peritrigeminal nucleus
nTPM: 82.9
2067 Female, age 85, both hemispheres 96.8
2179 Male, age 61, both hemispheres 80.3
2136 Male, age 76, both hemispheres 71.8
Pontine nuclei
nTPM: 64.8
2454 Male, age 74, left hemisphere 74.2
2319 Female, age 91, both hemispheres 70.0
1863 Male, age 55, unknown 66.0
2109 Female, age 72, unknown 65.9
1968 Male, age 76, left hemisphere 64.9
2787 Female, age 85, both hemispheres 63.7
2727 Male, age 61, right hemisphere 57.5
2115 Male, age 80, left hemisphere 56.2
Pontine raphe nucleus
nTPM: 63.6
2853 Male, age 76, midline 68.1
2122 Female, age 85, midline 59.0
Posteroventral cochlear nucleus
nTPM: 75.0
2070 Male, age 76, both hemispheres 80.5
2371 Male, age 61, both hemispheres 76.1
2752 Female, age 85, both hemispheres 76.0
2135 Female, age 91, both hemispheres 74.1
2341 Male, age 80, both hemispheres 68.3
Prepositus hypoglossal nucleus
nTPM: 78.6
2086 Male, age 80, both hemispheres 78.8
2855 Female, age 85, right hemisphere 78.3
Principal sensory trigeminal nucleus
nTPM: 57.7
2324 Male, age 76, both hemispheres 64.8
2367 Female, age 91, left hemisphere 64.7
2158 Male, age 61, both hemispheres 52.4
2008 Male, age 80, left hemisphere 49.0
Reticular pontine nucleus, caudal
nTPM: 58.4
2559 Male, age 74, both hemispheres 67.6
2092 Male, age 76, both hemispheres 64.9
2457 Female, age 91, both hemispheres 54.6
2332 Male, age 80, right hemisphere 46.3
Reticular pontine nucleus, oral
nTPM: 70.2
1939 Male, age 80, both hemispheres 78.9
2167 Male, age 76, both hemispheres 72.8
2366 Female, age 91, both hemispheres 72.3
2012 Female, age 85, both hemispheres 66.2
2361 Male, age 74, both hemispheres 60.8
Reticulotegmental nucleus
nTPM: 67.6
2322 Female, age 91, both hemispheres 77.6
2452 Male, age 74, both hemispheres 75.3
2333 Male, age 80, both hemispheres 64.1
2325 Male, age 76, both hemispheres 53.5
Spinal trigeminal nucleus, caudal
nTPM: 73.9
2312 Male, age 61, both hemispheres 79.6
2642 Male, age 74, both hemispheres 75.2
2308 Male, age 80, both hemispheres 75.1
2390 Female, age 91, both hemispheres 71.3
2447 Male, age 76, both hemispheres 68.2
Spinal trigeminal nucleus, interpolar
nTPM: 68.8
2386 Female, age 85, both hemispheres 74.7
2033 Male, age 80, both hemispheres 73.0
2625 Male, age 61, both hemispheres 67.5
2066 Male, age 76, right hemisphere 64.8
2389 Female, age 91, both hemispheres 63.8
Spinal trigeminal nucleus, oral
nTPM: 70.8
2737 Female, age 85, both hemispheres 75.1
1978 Male, age 76, both hemispheres 72.3
2164 Male, age 80, both hemispheres 65.0
Spinal vestibular nucleus
nTPM: 72.5
2384 Male, age 74, both hemispheres 78.2
2748 Male, age 76, both hemispheres 76.0
2186 Female, age 91, both hemispheres 72.4
2806 Female, age 85, both hemispheres 72.1
2780 Male, age 80, both hemispheres 71.1
2796 Male, age 61, both hemispheres 65.0
Subcoeruleus area
nTPM: 70.8
2451 Male, age 74, both hemispheres 80.6
2323 Female, age 91, left hemisphere 74.9
2369 Female, age 85, left hemisphere 74.2
1958 Male, age 80, both hemispheres 70.7
2089 Male, age 76, left hemisphere 53.4
Superior olive
nTPM: 63.9
2364 Male, age 74, right hemisphere 79.8
2020 Male, age 76, both hemispheres 65.1
2561 Female, age 91, both hemispheres 58.8
2329 Male, age 80, right hemisphere 58.4
1875 Female, age 85, both hemispheres 57.6
Superior vestibular nucleus
nTPM: 94.0
2383 Male, age 74, both hemispheres 120.9
2015 Male, age 80, both hemispheres 87.4
2061 Male, age 76, both hemispheres 73.6
Ventral medullary reticular nucleus
nTPM: 77.1
2372 Male, age 61, both hemispheres 81.9
2060 Male, age 76, both hemispheres 72.4
Ventral periolivary nuclei
nTPM: 63.3
2130 Female, age 85, both hemispheres 72.5
2023 Male, age 76, both hemispheres 71.2
2165 Male, age 80, both hemispheres 55.3
2794 Female, age 91, left hemisphere 54.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 76.8
2302 Female, age 91, both hemispheres 82.6
2741 Female, age 85, both hemispheres 81.0
2118 Male, age 80, both hemispheres 77.4
2180 Male, age 61, both hemispheres 75.7
1986 Male, age 76, both hemispheres 67.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 70.1
2359 Male, age 61, both hemispheres 79.6
2456 Female, age 91, both hemispheres 75.3
2840 Female, age 85, both hemispheres 69.8
2449 Male, age 74, both hemispheres 66.1
1959 Male, age 76, both hemispheres 65.9
2161 Male, age 80, both hemispheres 63.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 282.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 252.1
FF:10182-103D2 60 years, female 277.0
FF:10165-103B3 76 years, female 227.2
Medulla oblongata
Scaled Tags Per Million: 282.4
FF:10038-101F2 18-64 years, mixed 303.9
FF:10174-103C3 60 years, female 298.0
FF:10155-103A2 76 years, female 245.2
Pons
Scaled Tags Per Million: 219.2
FF:10033-101E6 18-54 years, mixed 219.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 159.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 136.6
Samples: 4

Max nTPM: 152.9
Min nTPM: 120.4
Sample A Female 138.2
Sample B Female 120.4
Sample C Male 135.0
Sample D Male 152.9
Pons
nTPM: 159.6
Samples: 4

Max nTPM: 246.7
Min nTPM: 114.1
Sample A Female 246.7
Sample B Female 114.1
Sample C Male 147.6
Sample D Male 129.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 223.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 223.2
Samples: 4

Max nTPM: 228.9
Min nTPM: 218.4
Sample A Male 226.9
Sample B Male 218.4
Sample C Female 218.4
Sample D Female 228.9

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.8
79591729 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 9.6
79904258 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 5.2
197 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 4.9
196 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 2.5
195 Sense, RPS_Baylor_36960, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 4.8
79591729 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 9.8
197 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 4.6
79904258 Antisense, RP_071218_02_C03, Mouse strain C57BL/6J (56 days, male) 4.6
196 Antisense, RP_Baylor_102658, Mouse strain C57BL/6J (56 days, male) 3.9
195 Sense, RPS_Baylor_36960, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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